Hi Sergei, This is a bug in the script, I will ask Peter, the author, to look into it. Thanks! K On Thu, Jun 30, 2011 at 12:44 PM, Sergei Ryazansky <s.ryazansky@gmail.com>wrote:
Hello all,
First of all I would like to thank you guys for developing and mainting this so useful tool as Galaxy!
I have our own installation fo Galaxy (galaxy-dist version) with ncbi-blast-plus. Calling blastn results to the following error message:
An error occurred running this job:*Traceback (most recent call last): File "/home/galaxy/galaxy-dist/tools/ncbi_blast_plus/hide_stderr.py", line 29, in <module> sys.stderr.write("Error invoking command:\n%s\n\n%s\n" % (cmd, err)) NameError: name 'cmd' is not defined* * * Could you please explain, what this error can mean? The link to the shared history is* * http://dmbcserv.dyndns.org:8080/u/hogart/h/test-of-blast* * * * Thank you in advance!
___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at: