Changlong,
Lastz (and many other tools) allow you to select a reference from your history instead of picking one of Galaxy's built-in references. To do this, upload your reference and then when you run Lastz select "in your history" for the reference location, and pick your uploaded file as the reference dataset.
-Dannon
On Dec 9, 2011, at 4:44 AM, changlong wen wrote:
Hi,
In the NGS mapping option with "lastz" I cannot find the Cucumber genome. Could you please make this reference genome available? Or we have the reference sequence. How to add them in in the local server? Many thanks.
Have a good day.
Best regards changlong ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
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