18 Mar
2011
18 Mar
'11
3:50 p.m.
Hi, I was running an indel analysis on galaxy and I got a file as output that has rows that look like this:
fly2 9829 9830 I ATACTCCAA 79
Can anybody tell me what the last column (79) means? There is obviously an insertion at 9829 with those nucleotides, but I'm not sure what the 79 refers to even after reading the linked documentation. Is it the number of reads that had this? A quality score?
-John