we extended the galaxy functionality with a couple of smaller custom
scripts. Now we are in the need of some tmpFiles, since our data is
getting bigger. As far as I understand galaxy by now there might be
- job_working_directory (all "normal" files generated by the job,
deleted upon completion of job - safe?)
- tmp-folder within the database folder (custom path in universe_wsgi.ini?)
- system-tmp-folder (e.g. samtools-wraper -> only very limited space on
What is the best way to store temporary data in Galaxy (that can be
deleted after job completion)?
Thank you in advance for your help!