Re: [galaxy-user] running galaxy with SGE

On Tue, Oct 14, 2008 at 12:03 PM, Chris Cole <chris@compbio.dundee.ac.uk> wrote:

Hi,

I'm getting the following error when trying to run galaxy over our cluster (using the unified method): Exception: SGEJobRunner requires DRMAA_python which was not found

I've got what I think is the right package from here: http://gridengine.sunsource.net/howto/drmaa_python.html

But I'm getting a bit out of my depth here and it's asking about 'swig'. Can I just check that I'm not doing anything stupid and that I can run this DRMAA_python in user-space rather than globally while I get to grips with the set-up?

Did you install the python DRMAA package? It is not a "script" but a set of libraries that allow python programs to interact with SGE. Sean