3 Apr
2012
3 Apr
'12
2:24 p.m.
Hi Galaxy Team, I'm trying to use GATK DepthOfCoverage, and to give a BAM file of alined results as input.
My steps were: 1. BWA alignment 2. SAM-to-BAM 3. rmdup.
when I'm trying to give 3 (rmdup results) as an input to GATK DepthOfCoverage, an error appears: " Sequences are not currently available for the specified build."
What did I do wrong?
Many thanks! Lilach