Hi Assuming you know the length of your contigs, you can add them as a "custom build". Click on: 'Visualization -> 'New Track Browser' -> 'Add a Custom Build' Hope this helps. Regards, Hans On 08/04/2011 01:51 AM, vasu punj wrote:
IGV should allow you to do this but not sure about trackbrowser in Galaxy. Vasu
--- On Wed, 8/3/11, Jiannong Xu<jxu@nmsu.edu> wrote:
From: Jiannong Xu<jxu@nmsu.edu> Subject: [galaxy-user] visualization To: "galaxy-user@lists.bx.psu.edu"<galaxy-user@lists.bx.psu.edu> Date: Wednesday, August 3, 2011, 6:03 PM
Hi Jen,
I mapped illumine reads to draft genomic contigs, and try to visualize the mapping. Is there any way I can use my own reference contigs for visualization?
Thanks
John Xu NMSU
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