Hi
Assuming you know the length of your contigs, you can add them as a "custom build".
Click on: 'Visualization -> 'New Track Browser' -> 'Add a Custom Build'
Hope this helps.
Regards, Hans
On 08/04/2011 01:51 AM, vasu punj wrote:
IGV should allow you to do this but not sure about trackbrowser in Galaxy. Vasu
--- On Wed, 8/3/11, Jiannong Xujxu@nmsu.edu wrote:
From: Jiannong Xujxu@nmsu.edu Subject: [galaxy-user] visualization To: "galaxy-user@lists.bx.psu.edu"galaxy-user@lists.bx.psu.edu Date: Wednesday, August 3, 2011, 6:03 PM
Hi Jen,
I mapped illumine reads to draft genomic contigs, and try to visualize the mapping. Is there any way I can use my own reference contigs for visualization?
Thanks
John Xu NMSU
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The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
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