Thanks Jen. But it looks like the datatype was already set to fasta. I tried setting it again and saving but it didn't seem to help.
Is there anything else I can try?
thanks,
Greg
On Tue, Oct 9, 2012 at 9:10 PM, Jennifer Jackson jen@bx.psu.edu wrote:
Hi Greg,
Nice pic, it helps! My guess is that the datatype is not assigned as "fasta". To do this, click on the pencil icon for the custom reference genome dataset (#1) to bring up the Edit Attributes forms in the center panel. Then click on the "Datatype" tab and change this to be "fasta" and save.
Full help in our wiki with Custom genomes starts here: http://wiki.g2.bx.psu.edu/Support#Custom_reference_genome
Please let us know if you need more help,
Jen Galaxy team
On 10/9/12 11:08 AM, greg wrote:
Hi guys,
As shown in the attached screenshot I uploaded a fasta file. And I want to use it as my reference genome for running bow tie but it doesn't appear in the dropdown on the bow tie tool.
I'm sure I'm missing something obvious.
Thanks,
Greg
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