6 Nov
2013
6 Nov
'13
6:08 p.m.
Hi,
I am using Mpileup from the Main Server (current version 0.0.1). In theory, this tool can generate two formats of output files: either a .bcf or a pileup. However, I couldn't find the option to select a .bcf file, even when I click on "Set advanced options". When run, the program gives a pileup output format.
Would you have any advice to select the output format, or alternatively, a tool in Galaxy that can convert pileup into .vcf?
Many thanks for help,
--
Fabrice Besnard
Institute of Biology of the Ecole Normale Supérieure (IBENS)
46 rue d'Ulm, 75230 Paris cedex 05, France
8th floor. Office: Room 802. Lab: Room 817.
mail: fbesnard@biologie.ens.fr
Tel: +33-1-44-32-39-31