It's worth noting that command line parameters are sanitized for security purposes, so passing them unsanitized should only be done in controlled environments where security is not a concern. Otherwise, parameters should be restored to their original values by the tool or a wrapper around the tool.
--nate
On Oct 5, 2010, at 10:10, Jelle Scholtalbers j.scholtalbers@gmail.com wrote:
Hi,
take a look at <options sanitize="False" /> as used also in tools/fastq/fastq_manipulation.xml
Cheers, Jelle
On Tue, Oct 5, 2010 at 12:39 AM, Zhe Chen zhe@lanl.gov wrote:
Hi,
I was implementing a galaxy tool. A problem occurs when my input contains ">", linebreak, galaxy seems traslate them to __gt__, __cr____cn__. Is there a way to stop this translation?
Or suggestion to fix this problem?
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