I am working on the project to predict SNP from NGS data. I have found SNP using SAM tools and GATK (used reference hg19). I would like to know effect of SNP using SNPeff in GALAXY. I have given SNP in vcf format. I could not change the genome option as human, it is set is C.elegans by default Please help me to solve this On Tue, Mar 11, 2014 at 11:27 PM, Jennifer Jackson <jen@bx.psu.edu> wrote:
Hi Sathya,
The public Main Galaxy instance is down right now due to server issues. We anticipate this to be resolved by end of today.
Please watch the messages at http://usegalaxy.org for updates.
You can also follow Twitter at @galaxyproject, also posted on our wiki: https://wiki.galaxyproject.org/Galaxy%20on%20Twitter
Thanks,
Jen Galaxy team
On 3/11/14 2:45 AM, Sathya wrote:
Now the galaxy main server is not working. I would like to know how long it will take for galaxy to work again. -- With regards, Sathya.B
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-- With regards, Sathya.B