On 19/10/2010 03:27, Nate Coraor wrote:
Hi Laure,
I have not used PBS Pro recently, nor do I have access to it. However, we may be able to help if you paste the error message you're receiving from ./configure.
Thanks, --nate
Hi Nate,
For installing pbs_drmaa package we launch fisrt: ./configure --prefix=/appli/drmaa/1.0.2 --with-pbs=/appli/pbs/sles11/exec/10.4.0.101257
--with-pbs path we set is pbs pro root directory.
In config.log file, the error log is the following :
configure:12206: gcc -o conftest -pedantic -ansi -g -O2 -pthread -D_REENTRANT -D_THREAD_SAFE -DNDEBUG -D_GNU_SOURCE -I/appli/pbs/sles11/exec/10.4.0.101 257/include -L/appli/pbs/sles11/exec/10.4.0.101257/lib -Wl,-R/appli/pbs/sles11/exec/10.4.0.101257/lib conftest.c -ltorque -pthread >&5 /usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../x86_64-suse-linux/bin/ld: cannot find -ltorque collect2: ld returned 1 exit status configure:12213: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "FedStage DRMAA for PBS Pro" | #define PACKAGE_TARNAME "pbs_drmaa" | #define PACKAGE_VERSION "1.0.2" | #define PACKAGE_STRING "FedStage DRMAA for PBS Pro 1.0.2" | #define PACKAGE_BUGREPORT "mamonski@man.poznan.pl" | #define PACKAGE "pbs_drmaa" | #define VERSION "1.0.2" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char pbse_to_txt (); | int | main () | { | return pbse_to_txt (); | ; | return 0; | } configure:12234: result: no configure:12413: error: PBS libraries/headers not found; add --with-pbs to set PBS installation root.
Headers and libraries are not found although there are located in the path we set in --with-pbs option :
service>108% ls /appli/pbs/sles11/exec/10.4.0.101257 bin etc include lib man python sbin tcltk unsupported
service>109% ls /appli/pbs/sles11/exec/10.4.0.101257/include/ pbs_error.h pbs_ifl.h rm.h tm.h tm_.h
service>110% ls /appli/pbs/sles11/exec/10.4.0.101257/lib MPI ical init.d libattr.a liblog.a libnet.a libpbs.a libsite.a pbs_sched.a pm python xpbs xpbsmon
it seems we are not the only one having this issue with pbs pro. Do you have any idea ?
Thanks, Laure