Alex, Thanks that worked. I was thrown off by the word concatenate, which I mistakenly thought would join reads together (reads remain separate), and by the absence of the word merge, which is used when referring to combining two BAM datasets together in Galaxy. It seems to me that the tool to combine BAM datasets, "Merge Bam Files", and the tool to combine FASTQ datasets, "Concatenate datasets" work the same but "Concatenate datasets" works on any type of dataset. Edward On Dec 27, 2011, at 11:02 AM, Bossers, Alex wrote:
Edward, If you just want to conacatenate the fastq files (I assume that is what you mean) you can do that using the text manipulation tools: concatenate datasets tail-to-head. Good luck. Alex
Van: firstname.lastname@example.org [email@example.com] namens Edward Turk [firstname.lastname@example.org] Verzonden: zaterdag 24 december 2011 3:30 Aan: email@example.com Onderwerp: [galaxy-user] Merge FASTQ Databases
Hi Galaxy Users,
Can FASTQ Databases be merged using Galaxy?
Thanks, Edward ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
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