The guidelines regarding symbolic links in data library uploads in
covered (with examples) in this wiki:
The basic of library loading are in this wiki, including instructions
for uploading a new version of existing files:
Going forward, you will want to use the galaxy-dev(a)bx.psu.edu mailing
list instead for questions about local installs - this will give your
questions the best visibility to the development community:
Hopefully this helps!
On 12/14/12 2:51 AM, MONJEAUD wrote:
I created data libraries using options "Upload files from filesystem
paths" and "Link to files without copying into Galaxy".
It worked but I use symbolic links because my data are
The problem is that Galaxy takes the real link ("external_filename"
column in "dataset" table) and doesn't find the
Is there a way for galaxy to take the symbolic link in the
Thanks in advance for your help!