Hello Aaron, The genome was obtained from Genbank: http://www.ncbi.nlm.nih.gov/genome/10 http://www.ncbi.nlm.nih.gov/assembly/313038/ Download links can be found at the International Rice Genome Sequencing Project (IRGSP), but, we source from NCBI directly whenever possible. http://rgp.dna.affrc.go.jp/E/IRGSP/index.html http://rgp.dna.affrc.go.jp/E/IRGSP/Build4/build4.html These resources may also be helpful in general: http://www.gramene.org/resources/ http://plants.ensembl.org/Oryza_sativa/Info/Index http://rice.genomics.org.cn/rice/link/link.jsp Best, Jen Galaxy team ps. Going forward, please use the mailing list, galaxy-user(a)bx.psu.edu, for new questions to help us out with tracking. Thanks! On 12/13/12 9:11 AM, Aaron P Smith wrote: -- Jennifer Jackson http://galaxyproject.org