Dear Galaxy,
I have two ChIP reads and want to extract the regions in between them . For example chr1:66585377-66585400 and chr1:66585616-66585639 and now I would like to extract the region beginning from 665855401 up to 66585615. Can I get help from Galaxy tools.
regards, Amit
Amit, Extract Genomic DNA seq option in Galaxy will be useful. Vasu
--- On Thu, 4/14/11, pande pande@uni-muenster.de wrote:
From: pande pande@uni-muenster.de Subject: [galaxy-user] extraction of intervals To: galaxy-user@lists.bx.psu.edu Date: Thursday, April 14, 2011, 8:14 AM
Dear Galaxy, I have two ChIP reads and want to extract the regions in between them . For example chr1:66585377-66585400 and chr1:66585616-66585639 and now I would like to extract the region beginning from 665855401 up to 66585615. Can I get help from Galaxy tools.
regards, Amit
___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
galaxy-user@lists.galaxyproject.org
-
pande -
vasu punj