Enquiry regarding the working of Galaxy
Now the galaxy main server is not working. I would like to know how long it will take for galaxy to work again. -- With regards, Sathya.B
Seems to be down a lot these days...Maybe Dave could update us on the future of Galaxy. Scott Tighe Senior Core Laboratory Research Staff Advanced Genome Technologies Core NextGen Sequencing/Flow Cytometry University of Vermont and Vermont Cancer Center 149 Beaumont ave Health Science Research Facility 303/305 Burlington Vermont 05405 802-656-2482 (AGTC) On 3/11/2014 2:45 AM, Sathya wrote:
Now the galaxy main server is not working. I would like to know how long it will take for galaxy to work again. -- With regards, Sathya.B
___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
To search Galaxy mailing lists use the unified search at:
Hi Sathya, The public Main Galaxy instance is down right now due to server issues. We anticipate this to be resolved by end of today. Please watch the messages at http://usegalaxy.org for updates. You can also follow Twitter at @galaxyproject, also posted on our wiki: https://wiki.galaxyproject.org/Galaxy%20on%20Twitter Thanks, Jen Galaxy team On 3/11/14 2:45 AM, Sathya wrote:
Now the galaxy main server is not working. I would like to know how long it will take for galaxy to work again. -- With regards, Sathya.B
___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
To search Galaxy mailing lists use the unified search at:
-- Jennifer Hillman-Jackson http://galaxyproject.org
I am working on the project to predict SNP from NGS data. I have found SNP using SAM tools and GATK (used reference hg19). I would like to know effect of SNP using SNPeff in GALAXY. I have given SNP in vcf format. I could not change the genome option as human, it is set is C.elegans by default Please help me to solve this On Tue, Mar 11, 2014 at 11:27 PM, Jennifer Jackson <jen@bx.psu.edu> wrote:
Hi Sathya,
The public Main Galaxy instance is down right now due to server issues. We anticipate this to be resolved by end of today.
Please watch the messages at http://usegalaxy.org for updates.
You can also follow Twitter at @galaxyproject, also posted on our wiki: https://wiki.galaxyproject.org/Galaxy%20on%20Twitter
Thanks,
Jen Galaxy team
On 3/11/14 2:45 AM, Sathya wrote:
Now the galaxy main server is not working. I would like to know how long it will take for galaxy to work again. -- With regards, Sathya.B
___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
To search Galaxy mailing lists use the unified search at:
http://galaxyproject.org/search/mailinglists/
-- Jennifer Hillman-Jacksonhttp://galaxyproject.org
-- With regards, Sathya.B
Hi Sathya, The SnpEff tool is set up at this time for annotation with the /C. elegans/ WS220 genome only. Including human in the future on the public Main server at http://usegalaxy.org is under current evaluation. For now, use the tool in a local or cloud Galaxy instance, with the tool installed from the Tool Shed. Help to get started can be found here: http://getgalaxy.org http://usegalaxy.org/cloud http://usegalaxy.org/toolshed Take care, Jen Galaxy team On 3/12/14 1:44 AM, Sathya wrote:
I am working on the project to predict SNP from NGS data. I have found SNP using SAM tools and GATK (used reference hg19). I would like to know effect of SNP using SNPeff in GALAXY. I have given SNP in vcf format. I could not change the genome option as human, it is set is C.elegans by default Please help me to solve this
___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server atusegalaxy.org <http://usegalaxy.org>. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
To search Galaxy mailing lists use the unified search at:
-- With regards, Sathya.B
___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
To search Galaxy mailing lists use the unified search at:
-- Jennifer Hillman-Jackson http://galaxyproject.org
participants (3)
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Jennifer Jackson -
Sathya -
Scott Tighe