Hi all, I can't use the public interface in an effective way: items in history (i.e. the green boxes) cannot be expanded. More important, names of the items remind me something that has to deal with the tool/library path (e.g. 2010_03/pilot2/README_pilot2_snps). This happens on OS X and MS Windows systems, Firefox and Safari. Thanks
d /* Davide Cittaro, PhD
Head of Bioinformatics Core Center for Translational Genomics and Bioinformatics San Raffaele Scientific Institute Via Olgettina 58 20132 Milano Italy
Office: +39 02 26439140 Mail: cittaro.davide@hsr.itmailto:cittaro.davide@hsr.it Skype: daweonline */
Likewise. I can get to my "Saved Histories", but when i click on one, very few items (if any) show up in the rightside panel. ive also tried multiple browsers, etc. rich
________________________________ From: Cittaro Davide cittaro.davide@hsr.it To: "galaxy-user@bx.psu.edu" galaxy-user@bx.psu.edu Sent: Monday, December 5, 2011 7:39 AM Subject: [galaxy-user] public interface issues
Hi all, I can't use the public interface in an effective way: items in history (i.e. the green boxes) cannot be expanded. More important, names of the items remind me something that has to deal with the tool/library path (e.g. 2010_03/pilot2/README_pilot2_snps). This happens on OS X and MS Windows systems, Firefox and Safari. Thanks
d
/* Davide Cittaro, PhD
Head of Bioinformatics Core Center for Translational Genomics and Bioinformatics San Raffaele Scientific Institute Via Olgettina 58 20132 Milano Italy
Office: +39 02 26439140 Mail: cittaro.davide@hsr.it Skype: daweonline */
___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
Same here; I can't initiate "Generate Pileup" from Sam tools. When I select "Execute" the brower just stalls and does not add to my workflow. Also, I can't download bam or bai files when use right-click "save targe as." I have tried Internet Explorer and Firefox.
--- On Mon, 12/5/11, Richard Mark White whiter3@yahoo.com wrote:
From: Richard Mark White whiter3@yahoo.com Subject: Re: [galaxy-user] public interface issues To: "Cittaro Davide" cittaro.davide@hsr.it, "galaxy-user@bx.psu.edu" galaxy-user@bx.psu.edu Date: Monday, December 5, 2011, 9:17 AM
Likewise. I can get to my "Saved Histories", but when i click on one, very few items (if any) show up in the rightside panel. ive also tried multiple browsers, etc. rich
From: Cittaro Davide cittaro.davide@hsr.it To: "galaxy-user@bx.psu.edu" galaxy-user@bx.psu.edu Sent: Monday, December 5, 2011 7:39 AM Subject: [galaxy-user] public interface issues
Hi all, I can't use the public interface in an effective way: items in history (i.e. the green boxes) cannot be expanded. More important, names of the items remind me something that has to deal with the tool/library path (e.g. 2010_03/pilot2/README_pilot2_snps). This happens on OS X and MS Windows systems, Firefox and Safari. Thanks
d
/* Davide Cittaro, PhD
Head of Bioinformatics Core Center for Translational Genomics and Bioinformatics San Raffaele Scientific Institute Via Olgettina 58 20132 Milano Italy
Office: +39 02 26439140 Mail: cittaro.davide@hsr.it Skype: daweonline */
___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
-----Inline Attachment Follows-----
___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
Hi,
Sorry to add to the list of problems but I can't see "my history" at all, I can only see the main pane and the list of tools.
Best Wishes, David.
__________________________________ Dr David A. Matthews
Senior Lecturer in Virology Room E49 Department of Cellular and Molecular Medicine, School of Medical Sciences University Walk, University of Bristol Bristol. BS8 1TD U.K.
Tel. +44 117 3312058 Fax. +44 117 3312091
D.A.Matthews@bristol.ac.uk
On 5 Dec 2011, at 15:46, Mike Dufault wrote:
Same here; I can't initiate "Generate Pileup" from Sam tools. When I select "Execute" the brower just stalls and does not add to my workflow. Also, I can't download bam or bai files when use right-click "save targe as." I have tried Internet Explorer and Firefox.
--- On Mon, 12/5/11, Richard Mark White whiter3@yahoo.com wrote:
From: Richard Mark White whiter3@yahoo.com Subject: Re: [galaxy-user] public interface issues To: "Cittaro Davide" cittaro.davide@hsr.it, "galaxy-user@bx.psu.edu" galaxy-user@bx.psu.edu Date: Monday, December 5, 2011, 9:17 AM
Likewise. I can get to my "Saved Histories", but when i click on one, very few items (if any) show up in the rightside panel. ive also tried multiple browsers, etc. rich
From: Cittaro Davide cittaro.davide@hsr.it To: "galaxy-user@bx.psu.edu" galaxy-user@bx.psu.edu Sent: Monday, December 5, 2011 7:39 AM Subject: [galaxy-user] public interface issues
Hi all, I can't use the public interface in an effective way: items in history (i.e. the green boxes) cannot be expanded. More important, names of the items remind me something that has to deal with the tool/library path (e.g. 2010_03/pilot2/README_pilot2_snps). This happens on OS X and MS Windows systems, Firefox and Safari. Thanks
d /* Davide Cittaro, PhD
Head of Bioinformatics Core Center for Translational Genomics and Bioinformatics San Raffaele Scientific Institute Via Olgettina 58 20132 Milano Italy
Office: +39 02 26439140 Mail: cittaro.davide@hsr.it Skype: daweonline */
The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
-----Inline Attachment Follows-----
The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
http://lists.bx.psu.edu/ ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
Hello,
There was a temporary problem that has now been resolved. The History panel should now load as expected. Jobs will also be started, however the time to start and complete will likely be longer than usual due to many users initiating jobs at the same time.
Very sorry for any inconvenience,
Jen Galaxy team
On 12/5/11 4:39 AM, Cittaro Davide wrote:
Hi all, I can't use the public interface in an effective way: items in history (i.e. the green boxes) cannot be expanded. More important, names of the items remind me something that has to deal with the tool/library path (e.g. 2010_03/pilot2/README_pilot2_snps). This happens on OS X and MS Windows systems, Firefox and Safari. Thanks
d /* Davide Cittaro, PhD
Head of Bioinformatics Core Center for Translational Genomics and Bioinformatics San Raffaele Scientific Institute Via Olgettina 58 20132 Milano Italy
Office: +39 02 26439140 Mail: cittaro.davide@hsr.it mailto:cittaro.davide@hsr.it Skype: daweonline */
The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
galaxy-user@lists.galaxyproject.org
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Cittaro Davide -
David Matthews -
Jennifer Jackson -
Mike Dufault -
Richard Mark White