1 new commit in galaxy-central:
https://bitbucket.org/galaxy/galaxy-central/commits/2a34f751c32c/ changeset: 2a34f751c32c user: greg date: 2013-01-31 17:47:32 summary: Automatically create missing required tool shed files from samples when startign the tool shed server. affected #: 1 file
diff -r 5e60f2efceafaec9973ed1aa312cd66a0a11b3e8 -r 2a34f751c32cb9b4ab271d1f14c99406b9d04a54 run_community.sh --- a/run_community.sh +++ b/run_community.sh @@ -1,4 +1,37 @@ #!/bin/sh
cd `dirname $0` + +SAMPLES=" + community_wsgi.ini.sample + datatypes_conf.xml.sample + external_service_types_conf.xml.sample + migrated_tools_conf.xml.sample + reports_wsgi.ini.sample + shed_tool_conf.xml.sample + tool_conf.xml.sample + shed_tool_data_table_conf.xml.sample + tool_data_table_conf.xml.sample + tool_sheds_conf.xml.sample + openid_conf.xml.sample + universe_wsgi.ini.sample + tool-data/shared/ncbi/builds.txt.sample + tool-data/shared/ensembl/builds.txt.sample + tool-data/shared/ucsc/builds.txt.sample + tool-data/shared/ucsc/publicbuilds.txt.sample + tool-data/shared/igv/igv_build_sites.txt.sample + tool-data/shared/rviewer/rviewer_build_sites.txt.sample + tool-data/*.sample + static/welcome.html.sample +" + +# Create any missing config/location files +for sample in $SAMPLES; do + file=`echo $sample | sed -e 's/.sample$//'` + if [ ! -f "$file" -a -f "$sample" ]; then + echo "Initializing $file from `basename $sample`" + cp $sample $file + fi +done + python ./scripts/paster.py serve community_wsgi.ini --pid-file=community_webapp.pid --log-file=community_webapp.log $@
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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