Hi guys, sorry for this mail flooding, seriously...
On May 28, 2010, at 1:59 PM, Davide Cittaro wrote:
[cut]
Needless to say, it's pretty useless... the object is kept in memory until galaxy is alive....
use_printdebug = False
solves the memory issue (at least doesn't call paste.PrintDebugMiddleware which calls paste.intercept_output....) BTW, still not able to see BAM files... well, actually I can see the reads at the beginning of chromosome 10, which are the reads at the beginning of my BAM file :-(
d
/* Davide Cittaro
Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy
tel.: +39(02)574303007 e-mail: davide.cittaro@ifom-ieo-campus.it */