16 Apr
2009
16 Apr
'09
2:01 a.m.
Akash Mohan wrote:
As I submit a job through the web ui I could trace that the job does get submitted to the queue. But however it fails with an error as below:
galaxy.jobs.runners.sge DEBUG 2009-04-14 08:36:09,252 (15/15) state change: job finished, but failed
Hi Akash,
This state is provided by the scheduler itself. Have you ensured that you can run simple jobs from the command line as the Galaxy user? If so, can you check the SGE logs to see if anything is logged when the job fails? You might also want to check the contents of the job's output/error in the database/pbs/ directory.
--nate