Hello all,
I'd like to define 'blastxml' to 'tabular' conversion within Galaxy so that this can be used automatically (e.g. Tools expecting just tabular data would have converted BLAST XML files listed in the drop down). The functionality to do this exists in my Python tool 'blastxml_to_tabular' currently in the 'ncbi_blast_plus' repository, which might have to move into 'blast_datatypes' for this to work. http://toolshed.g2.bx.psu.edu/view/devteam/ncbi_blast_plus http://toolshed.g2.bx.psu.edu/view/devteam/blast_datatypes
I've skimmed over the instructions here, but would like to look at a couple of real examples to make sure I've understood: http://lists.bx.psu.edu/pipermail/galaxy-dev/2013-February/013434.html
Are there any good examples of 3rd party Galaxy datatypes defining conversion like this?
Thanks,
Peter