Hi,
base: os:centos6.4 torque:4.2.7
I built a glaxy cluster today,and then I found the job completion status of torque queue is 'c',but the need state of galalxy is "ok".So I modified the torque.py file and solved this error. I do, right?
diff -r 8411a9f30feb lib/galaxy/jobs/runners/cli_job/torque.py --- a/lib/galaxy/jobs/runners/cli_job/torque.py Thu Dec 19 14:38:03 2013 -0500 +++ b/lib/galaxy/jobs/runners/cli_job/torque.py Fri Feb 28 13:02:48 2014 +0800 @@ -117,6 +117,8 @@ if id in job_ids: state = job.find('job_state').text # map PBS job states to Galaxy job states. + if state == u'C' : + state = 'ok' rval[id] = self.__get_job_state(state) return rval
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