It's actually in related to a new galaxy shed tool we developed called
meme-chip, we uploaded it to the main Tool Shed site.
We provided tool_data_table_conf.xml.sample and xxx.loc.sample along with
the tool. After the installation, the loc file has been populated
automatically, but the entry inside tool_data_table_conf.xml.sample didn't
Although it can be fixed easily by adding entries to the runtime
manually, it's good to know if it's the right way or we are missing
something in the shed tool repos.
On Thu, Nov 8, 2012 at 10:20 AM, Derrick Lin <klin938(a)gmail.com> wrote:
After installing the BWA from the Tools Shed, I find there is a
new tool_data_table_conf.xml got created under tool-data directory. The
file contains the entries of BWA's loc files.
I believe the installed BWA still relies on the tool_data_table_conf.xml
under galaxy root dir. Anyone can clarify what the one under tool-data dir