There is no documentation for this but it is possible. You need to install
R and two R libraries (getopt, Matrix) in order to execute the charts
R-script. Once R is configured you can add the charts tool to the tools
directory and update your config/tool_conf.xml file accordingly before
restarting your local instance.
Having said this, can you specify in more detail why the tool installation
fails. Can you install other tools from the toolshed without problems?
I hope this helps.
On Mon, Jul 17, 2017 at 9:53 AM, Steven Shen <ishenweiyan(a)gmail.com> wrote:
Cytoscape, Bar diagram(NVD3), Horizontal(NVD3) , and other NVD3
visualization tools are working good on my local galaxy except the
jqplots, such as Box plot, Discrete Histogram, with error "This
visualization requires the 'charts' tool. Please make sure it is
installed." It seems i need to install Charts first.
Actually Charts could be installed from the Tool Shed through the Admin
Interface, but it failed sometimes as the bad network. so is there any doc
about installing Charts/tools through command line?
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