I am planning on integrating sequence alignment programs to our local
instance of Galaxy. I was wondering if anyone else has developed
wrappers for the following programs: Maq, Bowtie, Tophat.
Also, is there a central repository for any new tools or wrappers that
have been created by other developers? It would certainly be a useful
resource and if I need to wrap these tools myself I would be happy
share the code.
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