Just catching up with the galaxy-dev mailing list, and found some remarks about RPy not working with R 3.0. If that's bugging you, you may be interested in my patches for RPy-1.0.3a, which enable it to work with R 3.0.1 (and probably 3.0.0, but we've moved on from that here).
Attached, in case it helps someone.
cheers, Simon
PS: Anyone on EL6 could just install the python-rpy package from the AgResearch repo, http://rpm.agresearch.co.nz/ ;-)
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