Hi Marija, you can try to set
retry_job_output_collection = 3
in your config/galaxy.ini file and see if that helps.
Cheers, Nicola
On 23/01/17 09:47, Durdevic, Marija wrote:
Dear developers,
From time to time I have issue on my Galaxy server. The problem is when job is done and results has to be written to the database something happened. The error message is: “/home/data/galaxy_database/files/024/dataset_24790.dat: Resource temporarily unavailable” where “/home/data/galaxy_database/files/024/dataset_24790.dat” is path to the output file. Although it produced reasonable output the job is shown as failed.
I am running galaxy over Slurm and we use NFS for connection with storage.
Do anyone have idea what can be possible reason for such error?
Thanks in advance.
Best,
Marija
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