Hello Amit,
There is no tool to perform this task as a stand-alone function. However, using a annotation/mapping tool such as Blastn on a local or cloud instance and a combination of Galaxy's comparison and filter tools (such as those in the group " Operate on Genomic Intervals") could likely be used to develop a workflow.
Best wishes,
Jen Galaxy team
On 6/12/12 4:55 AM, Amit Pande wrote:
Hi,
Is there no tool in Galaxy which can detect chimera transcripts ???
warm regards, Amit
The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at: