12 Feb
2013
12 Feb
'13
11:54 a.m.
Dear users,
Has anyone encountered this problem before? I wrote a shell script which among other things calls some R scripts like this..
Rscript rscript_to_use.R
When I run it via terminal it's fine plus I have verified Rscript works. But when I upload my tool to Galaxy and try to run it I get the following error:
/path/to/script/shell_script.sh: line 26: Rscript: command not found
Can anyone help?
Thank you in advance, Makis Ladoukakis