23 Oct
2012
23 Oct
'12
2:10 a.m.
Hello Galaxy community,
I would like to know if there is any available tool in Galaxy for automated gene annotation. I need gene annotation in GTF or GFF3 format to run CuffDiff on a RNA-Seq project that we are. If not, do you recommend me any software or utility. We have the genome annotated in GenBank format, but searching in the web I've seen that is not possible to convert GenBank format to GTF or GFF3.
I appreciate your opinions. Thank you, Bernardo
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*Bernardo Bello Ortí*
Becario predoctoral FPI
CReSA-IRTA
Campus de Bellaterra-Universitat Autònoma de Barcelona
Edifici CReSA
08193 Bellaterra (Barcelona)
Tel.: 647 42 52 63 *www.cresa.es *
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