Hi Kanwar,

I interested in trying Bismark under Galaxy. Could you please point me where I can use it.

please have a look at the pull request ... https://bitbucket.org/galaxy/galaxy-central/pull-request/73/bismark-wrapper-... Cheers, bjoern

Thanks Kanwar

On Mon, Oct 8, 2012 at 8:08 AM, Björn Grüning <bjoern.gruening@pharmazie.uni-freiburg.de> wrote: Hi David,

please do not hijack a different thread :) If you are analysing Bisulfite data i would recommend to have a look at http://www.bioinformatics.babraham.ac.uk/projects/ ... especially at bismark.

We have written a wrapper for bismark, its still in testing phase but if you like to try it out, you are welcome.

Cheers, Bjoern

> Hi, there, > > I just got two genome-wide Bisulfite sequences from BGI and start to > analyze the data. > > I am trying to use Galaxy; but I find there is no such platform > available. Does anybody know where I can find this kind platform at > Galaxy or other places. > > Thanks > > David >

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