copying files via galaxy API
Hi Everyone, Is there a way to directly copy files from galaxy with the proper file name? I'm currently using the galaxy API to download files via HTTP, but it is very slow and would like to speed up the process of copying files directly, but am having a hard time getting the proper file names. Are there any suggestions on how to copy files directly from galaxy without HTTP and with the proper filenames? # Looking up files via API $ ./display.py <api_key> http://localhost:8080/api/libraries/86cf1d3beeec9f1c/contents/32ff5cf1b96c1d... Member Information ------------------ ldda_id: 32ff5cf1b96c1df7 misc_blurb: 10,028,615 lines name: H3K9me3_L3_FE_2.wig data_type: txt file_name: /galaxy-central/database/files/000/dataset_733.dat uploaded_by: rpark@bu.edu template_data: {} genome_build: ? model_class: LibraryDataset misc_info: uploaded txt file file_size: 48439126 metadata_data_lines: 10028615 message: id: 32ff5cf1b96c1df7 date_uploaded: 2012-12-15T01:53:08.655366 metadata_dbkey: ? # Downloading files using a URL like http://127.0.0.1:8080/datasets/a4975bc1e68708d4/display?to_ext=txt thanks, Richard
participants (2)
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Jeremy Goecks
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Richard Park