May 2024 - Small-scale-admins - lists.galaxyproject.org

BoF at GCC
by Hans-Rudolf Hotz 24 Jun '24

24 Jun '24

Dear All FYI (as discussed in our last meeting) We have just submitted the request for a BoF (https://galaxyproject.org/events/gcc2024/abstracts/#birds-of-a-feather-bof-…) Regards, Lucille and Hans-Rudolf

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Time per week necessary for admin
by VLAD VISAN 28 May '24

28 May '24

Dear Small-Scale Admins, Thank you for the advice during last week's meeting. In the event we choose Galaxy (which we are leaning towards), I would be responsible for setting up the Galaxy instance as well as the initial maintenance. While a sysadmin would do the long-term maintenance. As such, we were wondering, in your experience, for those who wish to answer: 1. How many hours per week are necessary for purely admin-related maintenance on a local Galaxy instance (used by let's say 50 users) ? * Not the time for developing custom tools, as users would be expected to do that (they already do this outside of Galaxy) * Not the time for end-user assistance, as we plan to create in-house tutorials * Just the time necessary for e.g. restarting Galaxy, creating a back-up of it's database, repairing in case of a crash, ... * Ideally this time would be low or even zero outside of upgrades. But that is probably being idealistic. 2. How stable is Galaxy? I imagine crashes are rare. 3. Are there any time-consuming admin. tasks that I am not aware of/did not mention above? 4. Galaxy version upgrades 1. How often is it recommended to upgrade the Galaxy version? 2. What are the consequences of not upgrading for a while, apart from Python min/max version incompatibility? 3. How much time does an upgrade usually take? 4. I am also worried that if I fork Galaxy to modify the engine (which I plan to do slightly) there will be merge conflicts in the future. This would make upgrades even harder, but I don't see a way around it. Apart from maybe proposing the features to be merged into the main Galaxy repo, although they may be too specific. Thank you, Regards, Vlad Visan Ingénieur de Recherche - OSUG Bureau 106 OSUG D [ http://www.univ-grenoble-alpes.fr/ | www.univ-grenoble-alpes.fr ] Rejoignez-nous sur [ https://www.facebook.com/UGrenobleAlpes/ | Facebook ] - Suivez-nous sur [ https://twitter.com/UGrenobleAlpes | Twitter ]

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GCC2024 SSA online
by VLAD VISAN 27 May '24

27 May '24

Hi all, I was looking at the GCC2024 schedule, and I was wondering (maybe I'm not the only one): 1. Are there any SSA sub-events within GCC2024, that you can participate in / view online? 2. Do you need to pay to see the GCC2024, as a whole, online? 3. Do you need to pay to see the SSA sub-event online? Thank you, Vlad PS: I'll be submitting the pull request for the slides next week.

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May 15th: Next meeting of "small scale servers" group
by Delisle Lucille 02 May '24

02 May '24

Dear all, Our next meeting will be on Thursday, May 15th at 3PM CEST (1PM UTC). Here is the zoom link: https://epfl.zoom.us/j/69775900853?pwd=R1gzbllUZzg0RFUrM0Mzd2MvczE3Zz09 Here is our working document, do not hesitate to put your topic suggestions: https://docs.google.com/document/d/1KTz4qxZBG4Z3sF23dVKPWXYz1mCNo2YDygSUHqt… Regards, Hans-Rudolf and Lucille PS: the upcoming calls for your calendar: June: BoF at GCC2024 (Brno) 19. September 3PM CEST (1PM UTC) 21. November 3PM CET (2PM UTC) -- Lucille Delisle, PhD PostDoc Duboule Lab Laboratory of Developmental Genomics EPFL SV ISREC UPDUB SV 2843 CH-1015 Lausanne Tel : +41 21 693 97 08

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Small-scale-admins May 2024