April 2019 - Galaxy-training - lists.galaxyproject.org

regarding transcriptome read cleaning
by Rahul Shelke 23 Mar '25

23 Mar '25

Dear sir, I am using Australia Galaxy for assembling transcriptome lib. For cleaning of Illumina nextera 500 reads, I am using a trimmomatic program. This program contains nextera paired end adapter cleaning option. Now I am confused whether I should use galaxy nextera adapter or use specific nextera 500 adapter for cleaning. Kindly provide your suggestion. -- Rahul G. Shelke PhD Scholar Department of Biosciences and Bioengineering. Indian Institute Of Technology. Guwahati,Assam, India.781039 +91-9954919129 Skype ID:- rahulshelke2

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GCC2019 submission 43 update
by GCC2019 03 May '19

03 May '19

Dear authors, we acknowledge that we received new files for your GCC2019 submission. The information about this update is shown below. Number: 43 Authors: Bérénice Batut, Saskia Hiltemann, Helena Rasche, Timothy Griffin, Pratik Jagtap, Praveen Kumar, Subina Mehta, Galaxy Training Network, Björn Grüning and Dave Clements Title: Galaxy and Training: 2019 updates from the Galaxy Training Network Uploaded by: a conference chair Updates: abstract, version 2 (62094 bytes) To access the new version of your submission you should log in to the GCC2019 EasyChair page.

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GTN (online) CoFest and community call - 16th of May
by Bérénice Batut 16 Apr '19

16 Apr '19

Dear all, The Galaxy Training Network is organizing online CoFests (Collaboration/Contribution Fests) every 3 months for a day of the collaborative work on the training content. The next one will be on the 16th of May. Anyone who would like to contribute on any other topics is very welcome to join. We will coordinate via Hangout <https://hangouts.google.com/hangouts/_/calendar/Z2FsYXh5dW5pZnJlaWJ1cmdAZ21…> (drop-in channel we will keep open the whole day) and the GTN Gitter channel <https://gitter.im/Galaxy-Training-Network/Lobby>. During the day, we plan to have GTN community calls to discuss the recent changes and future directions. To accommodate different time zones and schedules, we will have 2 calls (with similar discussions) at 8am (UTC + 2) <http://arewemeetingyet.com/Berlin/2019-05-16/08:00/GTN%20meeting> and 4pm (UTC + 2) <http://arewemeetingyet.com/Berlin/2019-05-16/16:00/GTN%20meeting> via Hangout <https://hangouts.google.com/hangouts/_/calendar/Z2FsYXh5dW5pZnJlaWJ1cmdAZ21…>. More details about this day can be found on the Galaxy website (https://galaxyproject.org/events/2019-05-gtn/ <https://galaxyproject.org/events/2019-05-gtn/>) and the dedicated GitHub issue <https://github.com/galaxyproject/training-material/issues/1339>. Please forward this email to any potentially interested individuals and groups. We hope to see you there, Best, Bérénice Bérénice Batut ----------------------------------------------------------------------------------- PhD in Bioinformatics and Computational Biology Post-doc in Bioinformatics ----------------------------------------------------------------------------------- http://bebatut.fr

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