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Galaxy-France February 2013

galaxy-france@lists.galaxyproject.org

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2013 Galaxy Community Conference (GCC2013) Registration and Abstract Submission are Now Open
by Dave Clements 15 Mar '13

15 Mar '13

Dear Galaxy-France Community, We are pleased to announce that early registration<http://wiki.galaxyproject.org/Events/GCC2013/Register> and paper and poster abstract submission<http://wiki.galaxyproject.org/Events/GCC2013/Abstracts> are now open for the 2013 Galaxy Community Conference (GCC2013)<http://wiki.galaxyproject.org/Events/GCC2013> . GCC2013 will be held 30 June through July 2 in Oslo Norway, at the University of Oslo <http://uio.no/>. GCC2013 <http://wiki.galaxyproject.org/Events/GCC2013> is an opportunity to participate in two full days of presentations, discussions, poster sessions, keynotes, lightning talks and breakouts, all about high-throughput biology and the tools that support it. The conference also includes a Training Day<http://wiki.galaxyproject.org/Events/GCC2013/TrainingDay> for the second year in a row, this year with more in-depth topic coverage, more concurrent sessions, and more topics. If you are a biologist or bioinformatician performing or enabling high-throughput biological research, then please consider attending. GCC2013 is aimed at: - Bioinformatics tool developers and data providers - Workflow developers and power bioinformatics users - Sequencing and Bioinformatics core staff - Data archival and analysis reproducibility specialists *Early registration <http://wiki.galaxyproject.org/Events/GCC2013/Register>* *saves up to 75% off regular registration costs,* and is very affordable, with combined registration (Training Day<http://wiki.galaxyproject.org/Events/GCC2013/TrainingDay> + main meeting) starting at ~ €95 for post-docs and students. Registering early also assures you a spot in the Training Day workshops you want to attend. Once a Training Day session becomes full, it will be closed to new registrations. Early registration closes 24 May. *Abstract submission<http://wiki.galaxyproject.org/Events/GCC2013/Abstracts> * for oral presentations closes 12 April, and for posters on 3 May. Please consider presenting your work. If you are working with big biological data, then the people at this meeting want to hear about your work. Thanks, and hope to see you in Oslo! The GCC2013 Organizing Committee<http://wiki.galaxyproject.org/Events/GCC2013/Organizers> PS: And please help get the word out<http://wiki.galaxyproject.org/Events/GCC2013/Promotion>, especially to any Europe based organizations that we are not reaching. -- http://galaxyproject.org/GCC2013 <http://galaxyproject.org/wiki/GCC2012>http://galaxyproject.org/ http://getgalaxy.org/ http://usegalaxy.org/ http://wiki.galaxyproject.org/

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Galaxy February 8, 2013 Distribution & News Brief
by Jennifer Jackson 08 Feb '13

08 Feb '13

Galaxy Feb 8, 2013 Distribution & News Brief <http://wiki.galaxyproject.org/News/2013_02_08_GalaxyNewsBrief> *Complete News Brief <http://wiki.galaxyproject.org/DevNewsBriefs/2013_02_08> * *Highlights:* * /Improvements/ to our release process <http://wiki.galaxyproject.org/DevNewsBriefs/2013_02_08#Improvements_to_Rele…>. *Release tag must be used in the hg update command to upgrade*. More at *usegalaxy.org <http://wiki.galaxyproject.org/Admin/Get%20Galaxy>*. * Tool Shed /Complex repository dependencies/ <http://wiki.galaxyproject.org/DefiningRepositoryDependencies#Complex_reposi…> are introduced, streamlining core dependency use across individual tools. * Also updated in the Tool Shed: multiple repository installation, dependency installation (when defined), and many usability enhancements and fixes. * New /Bedgraph-to-bigwig/ <http://wiki.galaxyproject.org/Learn/Datatypes#BedGraph> tool plus /Filter/ tool updated. * /Workflows/ now include option to export an image and the core /Framework/ now allows more unified reference genome usage and access. * /Ten Community Pull-Requests/ incorporated, plus another contribution to the tool Shed, addressing general usability, API, tools, error handling, workflows, and more. Thanks!! * Review highlights from the latest monthly */Galaxy Update/* <http://wiki.galaxyproject.org/GalaxyUpdates> newsletter and Galaxy Project Stats <http://wiki.galaxyproject.org/Galaxy%20Project/Statistics>! * Plus bug fixes and related enhancements for visualizations, histories, workflows, and tools. *http://getgalaxy.org* *http://bitbucket.org/galaxy/galaxy-dist* *http://galaxy-dist.readthedocs.org * new: $ hg clone http://www.bx.psu.edu/hg/galaxy galaxy-dist upgrade: $ hg pull $ hg update release_2013.02.08 To ensure that you continue to receive updates about *Galaxy Distributions and News Briefs* <http://wiki.galaxyproject.org/DevNewsBriefs>, be sure to subscribe to the Galaxy-Announce mailing list <http://wiki.galaxyproject.org/MailingLists#The_lists>, a low-volume list dedicated to News Items <http://wiki.galaxyproject.org/News> and priority messages from the Galaxy community <http://wiki.galaxyproject.org/Community> and project core team <http://wiki.galaxyproject.org/Galaxy%20Project>. /Thanks for using Galaxy,/ The Galaxy Team <http://wiki.galaxyproject.org/Galaxy%20Team>

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