Hi Guys, I updated to the latest galaxy distribution today and I cant seem to edit existing workflows. I've seen others with this error from a Sept 07 distribution ( http://dev.list.galaxyproject.org/Can-t-edit-Galaxy-Workflow-ElementInterfac...), but Jeremy Goecks mentioned that this might of been fixed in the Sept 20 distribution.
Any ideas on how to fix this? Thanks, Richard
Server error URL: http://127.0.0.1:8080/workflow/load_workflow?id=f597429621d6eb2b&_=13524... Module weberror.evalexception.middleware:*364* in respond
http://127.0.0.1:8080/workflow/editor?id=f597429621d6eb2b#app_iter *=
* self*.*application*(*environ*,* detect_start_response*)* Module paste.debug.prints:*98* in __call__
http://127.0.0.1:8080/workflow/editor?id=f597429621d6eb2b#environ*,*
self*.*app*)* Module paste.wsgilib:*539* in intercept_output
http://127.0.0.1:8080/workflow/editor?id=f597429621d6eb2b#app_iter *=
* application*(*environ*,* replacement_start_response*)* Module paste.recursive:*80* in __call__
http://127.0.0.1:8080/workflow/editor?id=f597429621d6eb2b#*return*
self*.*application*(*environ*,* start_response*)* Module paste.httpexceptions:*632* in __call__
http://127.0.0.1:8080/workflow/editor?id=f597429621d6eb2b#*return*
self*.*application*(*environ*,* start_response*)* Module galaxy.web.framework.base:*160* in __call__
http://127.0.0.1:8080/workflow/editor?id=f597429621d6eb2b#body *=*
method*(* trans*,* ****kwargs *)* Module galaxy.web.framework:*73* in decorator
http://127.0.0.1:8080/workflow/editor?id=f597429621d6eb2b#*return*
simplejson*.*dumps*(* func*(* self*,* trans*,* ***args*,* ****kwargs *)* *)* Module galaxy.webapps.galaxy.controllers.workflow:*733* in load_workflow
http://127.0.0.1:8080/workflow/editor?id=f597429621d6eb2b#'tooltip'*:
* module*.*get_tooltip*(* static_path*=*url_for*(* '/static' *)* *)**,* Module galaxy.workflow.modules:*258* in get_tooltip
http://127.0.0.1:8080/workflow/editor?id=f597429621d6eb2b#*return*
self*.*tool*.*help*.*render*(* static_path*=*static_path *)* *AttributeError: 'NoneType' object has no attribute 'render'* []
Richard,
This is fixed as of 5013377e0bf7. This may not be in the next distribution, but will be in the one after that. Of course, you can manually pull the change at any time.
-Dannon
On Nov 9, 2012, at 4:20 PM, Richard Park rpark@bu.edu wrote:
Hi Guys, I updated to the latest galaxy distribution today and I cant seem to edit existing workflows. I've seen others with this error from a Sept 07 distribution (http://dev.list.galaxyproject.org/Can-t-edit-Galaxy-Workflow-ElementInterfac...), but Jeremy Goecks mentioned that this might of been fixed in the Sept 20 distribution.
Any ideas on how to fix this? Thanks, Richard
Server error
URL: http://127.0.0.1:8080/workflow/load_workflow?id=f597429621d6eb2b&_=13524... Module weberror.evalexception.middleware:364 in respond
app_iter = self.application(environ, detect_start_response)
Module paste.debug.prints:98 in __call__
environ, self.app)
Module paste.wsgilib:539 in intercept_output
app_iter = application(environ, replacement_start_response)
Module paste.recursive:80 in __call__
return self.application(environ, start_response)
Module paste.httpexceptions:632 in __call__
return self.application(environ, start_response)
Module galaxy.web.framework.base:160 in __call__
body = method( trans, **kwargs )
Module galaxy.web.framework:73 in decorator
return simplejson.dumps( func( self, trans, *args, **kwargs ) )
Module galaxy.webapps.galaxy.controllers.workflow:733 in load_workflow
'tooltip': module.get_tooltip( static_path=url_for( '/static' ) ),
Module galaxy.workflow.modules:258 in get_tooltip
return self.tool.help.render( static_path=static_path )
AttributeError: 'NoneType' object has no attribute 'render' [] ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:
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