I installed Galaxy on an Ubuntu (18.04) VM following the 'Galaxy
Installation with Ansible' tutorial. Galaxy is serving on localhost and
does not use SSL.
I then followed the 'Galaxy Interactive Tools' tutorial to
install/enable Interactive Tools.
I skipped the part 'Getting a wildcard SSL certificate' and I modified
the group variables file group_vars/galayservers.yml as follows
- galaxy # NOT redirect-ssl
and in the templates/nginx/galaxy-gie-proxy.j2 file, I changed
# Listen on port 443
listen *:443 ssl;
# Listen on port 80 (no SSL)
When I execute EtherCalc (or RStudio), the link given in the blue box
under 'click here to display' is something like this:
but the actual view is found here (modification by hand):
It seems that the Interactive Tools Proxy serves on the wrong port.
The gie_proxy_port is 8000 and the proxy_pass in
/etc/nginx/sites-enabled/galaxy-gie-proxy is http://localhost:8000
Does anyone have an idea how to solve the problem?
Thanks in advance,
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We have a tool in Galaxy at https://usegalaxy.eu/root?tool_id=moabs.
We want to implement a one-click test using small data so that users
can quickly understand how to use the interface. There are two
difficulties in implementing the one-click test.
1. How to store small test data so that every new user can access it?
2. How to configure program settings automatically for the test data?
so that the test data is automatically uploaded, and other parameters
Please help suggest any possible solution to a one-click test. Thank you.
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Just a reminder that there are a couple of BCC2020 (BOSC + Galaxy)
deadlines today, July 10:
1. Birds of a feather submissions: https://bit.ly/bcc-propose-a-bof
If you are attending the meeting part of BCC, and you would benefit from
gathering your community at a BoF then please submit a proposal.
We also need these. Right now we have lots of attendees, and very few BoFs
(https://bcc2020.sched.com/overview/subject/BoF). This combination may not
work well in an online setting.
We might also extend the deadline to Sunday night. However, we might not.
So if you see this today, then please submit in the next ~12 or so hours.
2. Early registration closes: https://bcc2020.github.io/Registration/
At US Pacific time. (about 13:45 from right now). Registration rates
double after that, although they still aren't expensive. However, this
event might sell out before the end of the day. So, might want to register
The July 2020 Galaxy News is here:
In the July 2020 Issue
* BCC2020 starts July 17
* Early registration ends July 10
* BoF proposals due July 10
* Fellowships due July 5
* New Silver Sponsor: GalaxyWorks
* Full training, talk, and poster/demo schedules are online
* Galaxy and the NCBI Sequence Read Archive (SRA)
* Upcoming events
* Including the new Galaxy Developer Roundtable
* Galaxy Platform News
* Training material and doc updates
* Who's Hiring
* New blog posts
* New Releases
See you online in just over 2 weeks,