Dear developers,
I'm trying to launch a mpi version of test tool.
To do so, I have a test xml called sleep.xml but all he does is write the hostname of the machine in an output file.
(command: /usr/lib64/openmpi/bin/mpirun hostname > $output)
When I launch this tool as a local job (we use son of grid engine as the job scheduler), everything is ok.
When i specify the following line in the universe_wsgi.xml:
sleep = drmaa://-q galaxy -pe openmpi 8/
The program is launched but it is lost somewhere and juste doesn't do anything. It is just running and never ends.
Does someone has an explanation for that ?
Thanks in advance,
galaxy-dev@lists.galaxyproject.org