I am in the process of updating our galaxy servers (from
"latest_2014.08.11" to "latest_2014.10.06").
As announced in the NewsBriefs
current/active dataset (the dataset being shown/manipulated in the
center panel of 'analyze data') is now highlighted."
This is great and will help our users a lot. Thank you very much for
this new feature!
Unfortunately, I have encountered a small issue: when I hover to
another history item, and click on the 'Visualize' icon. The black frame
switches to that history item - though nothing changes in the center panel
As I said not a big problem, just a little bit confusing...shall I make
Trello card or is there a quick fix possible?
Hans-Rudolf Hotz, PhD
Friedrich Miescher Institute for Biomedical Research
As far as I know the Galaxy team is preparing a new release for next
week with a ton of great new features, like Interactive Environments,
multiple History view, Dataset collections and many more ...
If you want to help testing, trying out the latest features or just give
feedback we have put together a Galaxy Docker Image with all this stuff
Install Docker, run the following command and report any issues!
docker run -p 8080:80 -p 8800:8800 --privileged bgruening/galaxy-stable:dev
Happy testing and Thanksgiving to everyone!
The Galaxy Docker Team
- galaxy-dist stable (changeset: 11247:a9a0ac9c1afa) [Dec/18/2013]
- Cluster (torque)
When i start my WF, on step 2, in 'job_working_directory' created temp
(intermediate) dir (for tool step 3). But when step 2 is completed, temp
dir (in 'job_working_directory') removed(via galaxy) and step 3 failed. In
'universe_wsgi.ini' 'cleanup_job = never'. Why galaxy.jobs deleted temp
Any help is appreciated. Thanks.
I am programmer from BGI-Shenzhen,China.And I came accross some problems in the Galaxy docker and I need your advices.
As we known,Galaxy supports running tools within Docker containers since August 2014 release.I don't clear know why we need to develop the galaxy docker and what will improve by running galaxy tools whitin docker.Are there any details about that ?
We also want to make a Galaxy Tool Shed repository for Chinese biomedicine researchers,can us get the Galaxy Tool Shed repository from https://toolshed.g2.bx.psu.edu/? And how to make it ? Thank you very much.
沈维燕 | Steven Shen
China National GeneBank Mobile +86 186 8228 6556
Building No.11, Beishan Industrial Zone, Yantian District, Shenzhen China