1 new changeset in galaxy-central:
http://bitbucket.org/galaxy/galaxy-central/changeset/b42ad6209632/
changeset: r5166:b42ad6209632
user: kellyv
date: 2011-03-03 18:03:41
summary: Updated first test output file for SRMA wrapper to get it passing
affected #: 1 file (22 bytes)
Binary file test-data/srma_out1.bam has changed
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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1 new changeset in galaxy-central:
http://bitbucket.org/galaxy/galaxy-central/changeset/70a9d3998da6/
changeset: r5162:70a9d3998da6
user: jgoecks
date: 2011-03-02 23:31:09
summary: Set message type to error when history deletion fails due to sharing. Fixes #477
affected #: 1 file (31 bytes)
--- a/lib/galaxy/web/controllers/history.py Wed Mar 02 17:15:08 2011 -0500
+++ b/lib/galaxy/web/controllers/history.py Wed Mar 02 17:31:09 2011 -0500
@@ -250,9 +250,11 @@
n_deleted = 0
deleted_current = False
message_parts = []
+ status = SUCCESS
for history in histories:
if history.users_shared_with:
message_parts.append( "History (%s) has been shared with others, unshare it before deleting it. " % history.name )
+ status = ERROR
elif not history.deleted:
# We'll not eliminate any DefaultHistoryPermissions in case we undelete the history later
history.deleted = True
@@ -262,7 +264,6 @@
trans.new_history()
trans.log_event( "History (%s) marked as deleted" % history.name )
n_deleted += 1
- status = SUCCESS
if n_deleted:
message_parts.append( "Deleted %d %s. " % ( n_deleted, iff( n_deleted != 1, "histories", "history" ) ) )
if deleted_current:
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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1 new changeset in galaxy-central:
http://bitbucket.org/galaxy/galaxy-central/changeset/e5c0e7205ae2/
changeset: r5159:e5c0e7205ae2
user: natefoo
date: 2011-03-02 22:20:16
summary: Fix symlink to microbial_data.loc in buildbot setup.
affected #: 1 file (9 bytes)
--- a/buildbot_setup.sh Wed Mar 02 13:46:07 2011 -0500
+++ b/buildbot_setup.sh Wed Mar 02 16:20:16 2011 -0500
@@ -48,7 +48,7 @@
/galaxy/data/location/liftOver.loc
/galaxy/data/location/maf_index.loc
/galaxy/data/location/maf_pairwise.loc
-/galaxy/data/location/microbes/microbial_data.loc
+/galaxy/data/location/microbial_data.loc
/galaxy/data/location/mosaik_index.loc
/galaxy/data/location/perm_base_index.loc
/galaxy/data/location/perm_color_index.loc
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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1 new changeset in galaxy-central:
http://bitbucket.org/galaxy/galaxy-central/changeset/db8c44cdd4d9/
changeset: r5158:db8c44cdd4d9
user: natefoo
date: 2011-03-02 19:46:07
summary: Fix the qual_stats_boxplot and quality_score_distribution tests again, hopefully
affected #: 3 files (1.2 KB)
Binary file test-data/454Score.png has changed
Binary file test-data/boxplot_summary_statistics_out.png has changed
Binary file test-data/solexaScore.png has changed
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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