1 new commit in galaxy-central:
https://bitbucket.org/galaxy/galaxy-central/changeset/a09c2e0406c4/
changeset: a09c2e0406c4
user: dan
date: 2012-04-17 15:47:25
summary: Allow BCF files to be uploaded.
affected #: 1 file
diff -r ddc66d9905cc6bea0e10967013bc18737f0d10c7 -r a09c2e0406c471fc31f18f5f7cce49e1b4b92718 datatypes_conf.xml.sample
--- a/datatypes_conf.xml.sample
+++ b/datatypes_conf.xml.sample
@@ -170,7 +170,7 @@
<display file="igv/vcf.xml" /><display file="rviewer/vcf.xml" inherit="True"/></datatype>
- <datatype extension="bcf" type="galaxy.datatypes.binary:Binary" subclass="True"/>
+ <datatype extension="bcf" type="galaxy.datatypes.binary:Binary" subclass="True" display_in_upload="True"/><datatype extension="velvet" type="galaxy.datatypes.assembly:Velvet" display_in_upload="false"/><datatype extension="wig" type="galaxy.datatypes.interval:Wiggle" display_in_upload="true"><converter file="wig_to_bigwig_converter.xml" target_datatype="bigwig"/>
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
--
This is a commit notification from bitbucket.org. You are receiving
this because you have the service enabled, addressing the recipient of
this email.
1 new commit in galaxy-central:
https://bitbucket.org/galaxy/galaxy-central/changeset/fa3c59a4a56c/
changeset: fa3c59a4a56c
user: natefoo
date: 2012-04-16 22:26:10
summary: Allow for starting/stopping multiple servers directly in run.sh.
affected #: 1 file
diff -r 39200ca2e42dbc4ff264f9c9708795084fbb5092 -r fa3c59a4a56cb7965c05d073dc37e3a2504a9c54 run.sh
--- a/run.sh
+++ b/run.sh
@@ -52,4 +52,17 @@
fi
fi
-python ./scripts/paster.py serve universe_wsgi.ini $@
+if [ -n "$GALAXY_RUN_ALL" ]; then
+ servers=`sed -n 's/^\[server:\(.*\)\]/\1/ p' universe_wsgi.ini | xargs echo`
+ daemon=`echo "$@" | grep -q daemon`
+ if [ $? -ne 0 ]; then
+ echo 'ERROR: $GALAXY_RUN_ALL cannot be used without the `--daemon` or `--stop-daemon` arguments to run.sh'
+ exit 1
+ fi
+ for server in $servers; do
+ echo "Handling $server with log file $server.log..."
+ python ./scripts/paster.py serve universe_wsgi.ini --server-name=$server --pid-file=$server.pid --log-file=$server.log $@
+ done
+else
+ python ./scripts/paster.py serve universe_wsgi.ini $@
+fi
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
--
This is a commit notification from bitbucket.org. You are receiving
this because you have the service enabled, addressing the recipient of
this email.