1 new commit in galaxy-central:
https://bitbucket.org/galaxy/galaxy-central/commits/dfb77de2aff5/
Changeset: dfb77de2aff5
User: jgoecks
Date: 2013-05-30 18:24:17
Summary: Trackster: fix syntax error.
Affected #: 1 file
diff -r b9af82c027e7d720214f12f212adc592e6841ce9 -r dfb77de2aff56137a6f7bf8efc7761f03fcabf6f static/scripts/viz/trackster/tracks.js
--- a/static/scripts/viz/trackster/tracks.js
+++ b/static/scripts/viz/trackster/tracks.js
@@ -1577,7 +1577,7 @@
view.overview_drawable.request_draw();
this.changed();
},
- view
+
/** Close and reset overview. */
reset_overview: function() {
// Update UI.
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
--
This is a commit notification from bitbucket.org. You are receiving
this because you have the service enabled, addressing the recipient of
this email.
1 new commit in galaxy-central:
https://bitbucket.org/galaxy/galaxy-central/commits/e47d4ab26137/
Changeset: e47d4ab26137
User: fubar
Date: 2013-05-30 07:01:29
Summary: clean up fastqc updates a tiny bit
Affected #: 1 file
diff -r 34b03e0f3182af0601d747b7988308ddc2931149 -r e47d4ab261370d174641e0db1f5b7dd2adc96365 tools/rgenetics/rgFastQC.py
--- a/tools/rgenetics/rgFastQC.py
+++ b/tools/rgenetics/rgFastQC.py
@@ -62,10 +62,9 @@
infname = self.opts.inputfilename
linf = infname.lower()
trimext = False
- isgz = linf.endswith('.gz') or linf.endswith('.gzip')
# decompression at upload currently does NOT remove this now bogus ending - fastqc will barf
# patched may 29 2013 until this is fixed properly
- if isgz:
+ if ( linf.endswith('.gz') or linf.endswith('.gzip') ):
f = gzip.open(self.opts.input)
try:
testrow = f.readline()
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
--
This is a commit notification from bitbucket.org. You are receiving
this because you have the service enabled, addressing the recipient of
this email.
2 new commits in galaxy-central:
https://bitbucket.org/galaxy/galaxy-central/commits/eb524e42fc65/
Changeset: eb524e42fc65
Branch: next-stable
User: natefoo
Date: 2013-05-29 22:16:11
Summary: Update pgcleanup.py for dialect name change.
Affected #: 1 file
diff -r f3bb3c093851c7b07b8d24bfcfa30e986298fb89 -r eb524e42fc65eb69274857bcaf85030f0edd32f0 scripts/cleanup_datasets/pgcleanup.py
--- a/scripts/cleanup_datasets/pgcleanup.py
+++ b/scripts/cleanup_datasets/pgcleanup.py
@@ -108,7 +108,7 @@
args = url.translate_connect_args()
args.update(url.query)
- assert url.get_dialect().name == 'postgres', 'This script can only be used with PostgreSQL.'
+ assert url.get_dialect().name == 'postgresql', 'This script can only be used with PostgreSQL.'
self.conn = psycopg2.connect(**args)
https://bitbucket.org/galaxy/galaxy-central/commits/49cc4a899f2f/
Changeset: 49cc4a899f2f
User: natefoo
Date: 2013-05-29 22:16:24
Summary: merge next-stable.
Affected #: 1 file
diff -r 07a135ce18a7e40009fe93654ce46030ff213799 -r 49cc4a899f2ff5853d6c4f4c70ef9063df2f5b1b scripts/cleanup_datasets/pgcleanup.py
--- a/scripts/cleanup_datasets/pgcleanup.py
+++ b/scripts/cleanup_datasets/pgcleanup.py
@@ -108,7 +108,7 @@
args = url.translate_connect_args()
args.update(url.query)
- assert url.get_dialect().name == 'postgres', 'This script can only be used with PostgreSQL.'
+ assert url.get_dialect().name == 'postgresql', 'This script can only be used with PostgreSQL.'
self.conn = psycopg2.connect(**args)
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
--
This is a commit notification from bitbucket.org. You are receiving
this because you have the service enabled, addressing the recipient of
this email.