Branch: refs/heads/dev
Home: https://github.com/galaxyproject/galaxy
Commit: 6a266a19a947e853b37ce20eee9fc1f775b5f550
https://github.com/galaxyproject/galaxy/commit/6a266a19a947e853b37ce20eee9f…
Author: John Chilton <jmchilton(a)gmail.com>
Date: 2018-09-06 (Thu, 06 Sep 2018)
Changed paths:
M test/api/test_workflows.py
M test/api/test_workflows_from_yaml.py
M test/base/workflow_fixtures.py
M test/base/workflows_format_2/converter.py
M test/galaxy_selenium/navigates_galaxy.py
M test/galaxy_selenium/navigation.yml
M test/galaxy_selenium/smart_components.py
M test/selenium_tests/test_workflow_run.py
Log Message:
-----------
More tests for runtime workflow parameters.
Commit: 7806a84d1c22ba6f8b580fee78cb6bf594967936
https://github.com/galaxyproject/galaxy/commit/7806a84d1c22ba6f8b580fee78cb…
Author: John Chilton <jmchilton(a)gmail.com>
Date: 2018-09-06 (Thu, 06 Sep 2018)
Changed paths:
M lib/galaxy/model/__init__.py
M lib/galaxy/workflow/modules.py
M lib/galaxy/workflow/run.py
M lib/galaxy/workflow/run_request.py
M test/api/test_workflows.py
M test/base/workflow_fixtures.py
M test/selenium_tests/test_workflow_run.py
M test/unit/workflows/test_workflow_progress.py
Log Message:
-----------
Implement runtime parameters in nested workflows.
Commit: fc75d4f9fbf8c6406d80873570392e925e40f56c
https://github.com/galaxyproject/galaxy/commit/fc75d4f9fbf8c6406d8087357039…
Author: John Chilton <jmchilton(a)gmail.com>
Date: 2018-09-06 (Thu, 06 Sep 2018)
Changed paths:
M test/api/test_workflows.py
M test/base/workflow_fixtures.py
Log Message:
-----------
Test case - verify step parameters replace after workflow invoke pauses.
Commit: da18624067c819d4940658d9a5675c84977a2b3d
https://github.com/galaxyproject/galaxy/commit/da18624067c819d4940658d9a567…
Author: Marius van den Beek <m.vandenbeek(a)gmail.com>
Date: 2018-09-07 (Fri, 07 Sep 2018)
Changed paths:
M lib/galaxy/model/__init__.py
M lib/galaxy/workflow/modules.py
M lib/galaxy/workflow/run.py
M lib/galaxy/workflow/run_request.py
M test/api/test_workflows.py
M test/api/test_workflows_from_yaml.py
M test/base/workflow_fixtures.py
M test/base/workflows_format_2/converter.py
M test/galaxy_selenium/navigates_galaxy.py
M test/galaxy_selenium/navigation.yml
M test/galaxy_selenium/smart_components.py
M test/selenium_tests/test_workflow_run.py
M test/unit/workflows/test_workflow_progress.py
Log Message:
-----------
Merge pull request #6664 from jmchilton/runtime_parameters
Implement runtime parameters for subworkflows.
Compare: https://github.com/galaxyproject/galaxy/compare/5c54793ddfbd...da18624067c8
**NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/
Functionality will be removed from GitHub.com on January 31st, 2019.
Branch: refs/heads/dev
Home: https://github.com/galaxyproject/galaxy
Commit: 64652c28cf7ea88195b1c9008c46137c3bb3644a
https://github.com/galaxyproject/galaxy/commit/64652c28cf7ea88195b1c9008c46…
Author: mvdbeek <m.vandenbeek(a)gmail.com>
Date: 2018-09-05 (Wed, 05 Sep 2018)
Changed paths:
M test/api/test_workflows.py
Log Message:
-----------
Drop wait from cached job tests
Commit: 31d850b64484dd4f418a27c9313a954f89e37d7d
https://github.com/galaxyproject/galaxy/commit/31d850b64484dd4f418a27c9313a…
Author: mvdbeek <m.vandenbeek(a)gmail.com>
Date: 2018-09-06 (Thu, 06 Sep 2018)
Changed paths:
M lib/galaxy/jobs/handler.py
M lib/galaxy/managers/jobs.py
M lib/galaxy/model/__init__.py
Log Message:
-----------
Make discovery of cachable jobs more robust
We update the actually used version once the job inputs are ready. This
allows finding jobs when a dataset is being new / being updated while
the job is new. This is also more accurate since we record the dataset
versino that is actually being used when the tool is being evaluated.
This should allow chaching when simultaneously running workflows that
share steps.
Commit: a0982c1b900111d0b2a4add372f0caef0686a000
https://github.com/galaxyproject/galaxy/commit/a0982c1b900111d0b2a4add372f0…
Author: mvdbeek <m.vandenbeek(a)gmail.com>
Date: 2018-09-06 (Thu, 06 Sep 2018)
Changed paths:
M lib/galaxy/model/__init__.py
Log Message:
-----------
Only create HDA history if HDA columns have changed
This creates fewer versions because we ignore relationship changes.
Commit: 5c54793ddfbd86875322280ab74041152e6c8a40
https://github.com/galaxyproject/galaxy/commit/5c54793ddfbd86875322280ab740…
Author: John Chilton <jmchilton(a)gmail.com>
Date: 2018-09-06 (Thu, 06 Sep 2018)
Changed paths:
M lib/galaxy/jobs/handler.py
M lib/galaxy/managers/jobs.py
M lib/galaxy/model/__init__.py
M test/api/test_workflows.py
Log Message:
-----------
Merge pull request #6669 from mvdbeek/fix_cache_tests
Increase robustness and accuracy of job search / cache use
Compare: https://github.com/galaxyproject/galaxy/compare/89405fae9435...5c54793ddfbd
**NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/
Functionality will be removed from GitHub.com on January 31st, 2019.