Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 63e4663cc522d46f1749b08368c811108e73bb0d https://github.com/galaxyproject/galaxy/commit/63e4663cc522d46f1749b08368c81... Author: Nicola Soranzo nicola.soranzo@earlham.ac.uk Date: 2019-01-31 (Thu, 31 Jan 2019)

Changed paths: M lib/galaxy/tools/verify/__init__.py M lib/galaxy/tools/verify/interactor.py

Log Message: ----------- Cleanup some log messages and one import

Commit: 498eba2e290c6026e2f65929bc7c796bd730de42 https://github.com/galaxyproject/galaxy/commit/498eba2e290c6026e2f65929bc7c7... Author: Nicola Soranzo nicola.soranzo@earlham.ac.uk Date: 2019-01-31 (Thu, 31 Jan 2019)

Changed paths: M lib/galaxy/dependencies/pipfiles/default/pinned-dev-requirements.txt M lib/galaxy/dependencies/pipfiles/default/pinned-requirements.txt M lib/galaxy/dependencies/pipfiles/flake8/pinned-requirements.txt

Log Message: ----------- Update all dependencies

with `make update-dependencies` using pipenv 2018.11.26 .

Commit: d5a406cef70029e0e16b27e093ef8576dfe56322 https://github.com/galaxyproject/galaxy/commit/d5a406cef70029e0e16b27e093ef8... Author: Nicola Soranzo nicola.soranzo@earlham.ac.uk Date: 2019-01-31 (Thu, 31 Jan 2019)

Changed paths: M cron/add_manual_builds.py M lib/galaxy/actions/library.py M lib/galaxy/jobs/dynamic_tool_destination.py M lib/galaxy/jobs/runners/pulsar.py M lib/galaxy/managers/jobs.py M lib/galaxy/tools/parameters/basic.py M lib/galaxy/tools/parameters/meta.py M lib/galaxy/util/hash_util.py M test/api/test_workflows.py M test/functional/test_toolbox.py M tools/maf/maf_to_bed.py M tools/phenotype_association/senatag.py M tools/stats/gsummary.py

Log Message: ----------- Fix errors reported by new flake8 3.7.3

Commit: 8c2066f07ac7bb48c59cf8378e5a852e6fb82a4e https://github.com/galaxyproject/galaxy/commit/8c2066f07ac7bb48c59cf8378e5a8... Author: Dannon dannon.baker@gmail.com Date: 2019-01-31 (Thu, 31 Jan 2019)

Changed paths: M cron/add_manual_builds.py M lib/galaxy/actions/library.py M lib/galaxy/dependencies/pipfiles/default/pinned-dev-requirements.txt M lib/galaxy/dependencies/pipfiles/default/pinned-requirements.txt M lib/galaxy/dependencies/pipfiles/flake8/pinned-requirements.txt M lib/galaxy/jobs/dynamic_tool_destination.py M lib/galaxy/jobs/runners/pulsar.py M lib/galaxy/managers/jobs.py M lib/galaxy/tools/parameters/basic.py M lib/galaxy/tools/parameters/meta.py M lib/galaxy/tools/verify/__init__.py M lib/galaxy/tools/verify/interactor.py M lib/galaxy/util/hash_util.py M test/api/test_workflows.py M test/functional/test_toolbox.py M tools/maf/maf_to_bed.py M tools/phenotype_association/senatag.py M tools/stats/gsummary.py

Log Message: ----------- Merge pull request #7285 from nsoranzo/update_deps

Update all dependencies

Compare: https://github.com/galaxyproject/galaxy/compare/ed4f1290e84b...8c2066f07ac7