1 new commit in galaxy-central:

https://bitbucket.org/galaxy/galaxy-central/commits/ac32a07b4eea/ Changeset: ac32a07b4eea User: greg Date: 2014-01-24 19:56:29 Summary: Fix for discovering tools to eliminate from the toolbox for the tool shed's install and test framework. Affected #: 1 file

diff -r 9fb269cab1cea862d5d5bb997c4d0fdce9607e6a -r ac32a07b4eea8cee714368ecb247ce22cac01a4c test/install_and_test_tool_shed_repositories/repositories_with_tools/functional_tests.py --- a/test/install_and_test_tool_shed_repositories/repositories_with_tools/functional_tests.py +++ b/test/install_and_test_tool_shed_repositories/repositories_with_tools/functional_tests.py @@ -578,15 +578,22 @@ # Revisit this code if at some point we notice that Twill re-runs tests that should have been deleted. # Undoubtedly the following if statement will need to be enhanced to find the tool id in question. For # example, the following or is required because Twill replaces some spaces with underscores in test names. - if app_tool_id == tool_id or app_tool_id.replace( '_', ' ' ) == tool_id.replace( '_', ' ' ): - tools_to_delete_by_id.append( tool_id ) + if app_tool_id == tool_id: + print 'Setting tool id %s for deletion from app.toolbox[ tools_by_id ].' % str( app_tool_id ) + tools_to_delete_by_id.append( app_tool_id ) + else: + reset_spaces_app_tool_id = app_tool_id.replace( '_', ' ' ) + reset_spaces_tool_id = tool_id.replace( '_', ' ' ) + if reset_spaces_app_tool_id == reset_spaces_tool_id: + print 'Setting tool id %s for deletion from app.toolbox[ tools_by_id ].' % str( app_tool_id ) + tools_to_delete_by_id.append( app_tool_id ) # Delete the discovered twill-generated tests. for key in tests_to_delete: if key in test_toolbox.__dict__: - log.debug( 'Deleting test %s from test_toolbox.' % str( key ) ) + print 'Deleting test %s from test_toolbox.' % str( key ) del test_toolbox.__dict__[ key ] for tool_id in tools_to_delete_by_id: - log.debug( 'Deleting tool id %s from app.toolbox[ tools_by_id ].' % str( tool_id ) ) + print 'Deleting tool id %s from app.toolbox[ tools_by_id ].' % str( tool_id ) del app.toolbox.tools_by_id[ tool_id ]

def test_repository_tools( app, repository, repository_dict, tool_test_results_dicts, tool_test_results_dict,

Repository URL: https://bitbucket.org/galaxy/galaxy-central/

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