I am using python 2.6.4 and the latest version of galaxy. I am
attempting to install galaxy on my local ubuntu desktop.
I can upload files and the history is updated correctly with sqlite
In order to use mysql I get the schema from sqlite using
sqlite3 universe.sqlite .dump > ./temp.sql
I edited temp.sql to replace some quote around column names with `` .
I also moved the lone insert statement to the bottom.(file attached)
I use this sql script to initialize the mysql d/b named galaxy.
I use this line for the database connection in universe_wsgi.ini
When i start galaxy it seems ok until i try uploading a file when i get |a
RuntimeError: maximum recursion depth exceeded in the history pane on
|When I actually upload a file in sqlite and them dump out the schema it
generates additional inserts for event etc. When I apply those inserts
and then start up galaxy, I don't get this error on uploading the file.
However the file upload never completes even for a really small file. I
get the animated upload sign forever.