May 2014 Galaxy News Update
by Dave Clements
Hello all,
The May 2014 Galaxy Update
Newsletter<https://wiki.galaxyproject.org/GalaxyUpdates/2014_05> is
out! There's a lot going on in the project and the community right now. The
big news in the past month is the move from the Galaxy-User mailing list to
Galaxy Biostar<https://wiki.galaxyproject.org/GalaxyUpdates/2014_05#Galaxy_Biostar>
for
user support. This has been running for a week now, and has been very well
received.
The other big news is upcoming events. *Early registration for GCC2013
closes May 23
<https://wiki.galaxyproject.org/GalaxyUpdates/2014_05#GCC2014:_June_30_-_J...>*
. Register now <https://wiki.galaxyproject.org/Events/GCC2014/Register> and
save more than 70% on registration costs, and Training
Day<https://wiki.galaxyproject.org/Events/GCC2014/TrainingDay>
registration
is an additional 55% off if you register for both at the same time. We are
also pleased to announce this year's keynote
speaker<https://wiki.galaxyproject.org/GalaxyUpdates/2014_05#Keynote_Speaker:_Ste...>
and
the first ever GCC
Hackathon<https://wiki.galaxyproject.org/GalaxyUpdates/2014_05#Galaxy_Hackathon_at_...>
.
There's also a Galaxy UK
Tour<https://wiki.galaxyproject.org/GalaxyUpdates/2014_05#UK_May_2014_Galaxy_Tour>
which
is visiting Norwich and Edinburgh in May, and there are at least 17 other
Galaxy related events<https://wiki.galaxyproject.org/GalaxyUpdates/2014_05#Other_Events>
in
the next 70 days in Norway, France, *online*, Croatia, Thailand, Canada,
the US, the Netherlands, and Australia
As always, there are new
papers<https://wiki.galaxyproject.org/GalaxyUpdates/2014_05#New_Papers>
(47
of them, including four we highlighted), new public Galaxy
Servers<https://wiki.galaxyproject.org/GalaxyUpdates/2014_05#New_Public_Servers>
(Globus Genomics
Proteomics<https://wiki.galaxyproject.org/GalaxyUpdates/2014_05#Globus_Genomics_Prot...>
and SunLab Galaxy<https://wiki.galaxyproject.org/GalaxyUpdates/2014_05#SunLab>
), new jobs<https://wiki.galaxyproject.org/GalaxyUpdates/2014_05#Who.27s_Hiring>
(7
postings in 6 countries), new tools in the project
ToolShed<https://wiki.galaxyproject.org/GalaxyUpdates/2014_05#Galaxy_Project_ToolS...>
(um, *lots*), and a new public
ToolShed<https://wiki.galaxyproject.org/GalaxyUpdates/2014_05#New_Public_Tool_Sheds>
(at
the Dutch Techcentre for Life Sciences (DTL) <http://www.dtls.nl/dtl/>.
Dave Clements and the Galaxy Team<https://wiki.galaxyproject.org/GalaxyTeam>
http://galaxyproject.org/GCC2014
http://galaxyproject.org/
http://getgalaxy.org/
http://usegalaxy.org/
https://wiki.galaxyproject.org/
5 years, 9 months
Announcing the Galaxy Biostar Forum
by Jennifer Jackson
Dear Galaxy Community,
Galaxy has teamed up with Biostar to create a Galaxy User support forum
at https://biostar.usegalaxy.org!
We want to create a space where researchers using Galaxy can come
together and share both scientific advice and practical tool help.
Whether on usegalaxy.org, a Cloudman instance, or any other Galaxy, if
you have something to say about Using Galaxy, this is the place to do it!
Current integration with usegalaxy.org
* We imported the whole history of galaxy-user(a)bx.psu.edu mailing list
into Biostar
* If you access Galaxy Biostar from usegalaxy.org (menu Help/Galaxy
Biostar) you will be automatically logged in.
* A Galaxy Biostar account will be created for you if it did not
previously exist. To obtain this account’s password please use the
password reset feature of Galaxy Biostar
(https://biostar.usegalaxy.org/accounts/password/reset/).
* When you have a question, search Biostar directly from any Galaxy tool
page.
Read more about how to get started at
https://wiki.galaxyproject.org/Support/Biostar
Roll-out phase
* Galaxy Biostar is available at http://biostar.usegalaxy.org and will
be our primary avenue for support
* The galaxy-user(a)bx.psu.edu mailing list will continue to be supported
during the transition but starting now please use the
biostar.usegalaxy.org forum to ask all questions about using Galaxy.
* Please do not double post to both Galaxy Biostar and
galaxy-user(a)bx.psu.edu
* Send us feedback through the forum's post "Welcome to Biostar" to tell
us what you think.
What’s next
* Notice will be given when the galaxy-user(a)bx.psu.edu mailing list is
retired.
* Archives of galaxy-user(a)bx.psu.edu will remain accessible.
We hope you will like the change and look forward to any feedback you
may have.
Thank you for using Galaxy!
The Galaxy team
5 years, 9 months
GCC2014 Poster Abstracts due April 25, THIS FRIDAY
by Dave Clements
Hello all,
This is just a reminder that poster abstracts for the 2014 Galaxy Community
Conference (GCC2014) *are due this Friday. *
Abstracts can be submitted at
https://wiki.galaxyproject.org/Events/GCC2014/Abstracts
Note that posters are reviewed and accepted on a rolling basis, until all
slots are full. The deadline is this Friday but sooner may be better.
In other news:
- We are delighted to have Steven Salzberg as the keynote
speaker<https://wiki.galaxyproject.org/Events/GCC2014#Keynote_Speaker>
.
- Registration for the GCC2014
hackathon<https://wiki.galaxyproject.org/Events/GCC2014/Hackathon>is
now open
- Early registration<https://wiki.galaxyproject.org/Events/GCC2014/Register>for
the GCC2014
Training Day and
Meeting<https://wiki.galaxyproject.org/Events/GCC2014/Program>are also
open
- Abstracts <https://wiki.galaxyproject.org/Events/GCC2014/Abstracts>for
accepted talks will start showing up on the website this week.
Thanks, and hope to see you in Baltimore,
Dave C
On Fri, Feb 14, 2014 at 1:33 PM, Dave Clements
<clements(a)galaxyproject.org>wrote:
> Hello all,
>
> *We are pleased to announce that Early Registration
> <https://wiki.galaxyproject.org/Events/GCC2014/Register> and Talk and
> Poster Abstract Submission
> <https://wiki.galaxyproject.org/Events/GCC2014/Abstracts> are now open for
> the 2014 Galaxy Community Conference (GCC2014)
> <https://wiki.galaxyproject.org/Events/GCC2014>.*
>
> GCC2014 <https://wiki.galaxyproject.org/Events/GCC2014> will be held at
> the Homewood Campus<http://webapps.jhu.edu/jhuniverse/information_about_hopkins/campuses/home...>of Johns
> Hopkins University <http://jhu.edu>, in Baltimore, Maryland<http://visitors.baltimorecity.gov/>,
> United States, from June 30 through July 2, 2014. GCC2014<https://wiki.galaxyproject.org/Events/GCC2014>starts with a Training
> Day <https://wiki.galaxyproject.org/Events/GCC2014/TrainingDay> featuring
> four *five* parallel tracks, each with three, two and half hour long
> workshops. There are 13 different topics spanning the full Galactic
> spectrum of topics. Take a look!<https://wiki.galaxyproject.org/Events/GCC2014/TrainingDay>
>
> *Early registration
> <https://wiki.galaxyproject.org/Events/GCC2014/Register>* is now open.
> Register early and *avoid paying 70% more for regular registration costs.* Early registration is very affordable, with combined registration (Training
> Day <https://wiki.galaxyproject.org/Events/GCC2014/TrainingDay> + main
> meeting) starting at $140 for post-docs and students. Registration is
> capped this year at 250 participants, *and we expect to hit that limit*.
> Registering early assures you a place at the conference and also a spot in
> the Training Day workshops you want to attend.
>
> You can also book affordable conference housing at the same time you
> register. See the conference Logistics page<https://wiki.galaxyproject.org/Events/GCC2014/Logistics>for details on this and other housing options.
>
> *Abstract submission
> <https://wiki.galaxyproject.org/Events/GCC2014/Abstracts>* for both oral
> presentations and posters is also open. Abstract submission for oral
> presentations closes April 4, while poster submission closes April 25.
> Poster authors will be notified of acceptance status within two weeks of
> submission, while presentation authors will be notified no later than May2.
> *Please consider presenting your work. If you are dealing with big
> biological data, then this meeting wants to hear about your work.*
>
> The *GigaScience <http://www.gigasciencejournal.com/>* "Galaxy: Data
> Intensive and Reproducible Research" series announced for the last
> conference has published its first papers<http://www.gigasciencejournal.com/series/Galaxy>,
> *and is continuing to take submissions for this year's meeting and beyond*.
> BGI is also continuing to cover the article processing charges until the
> end of the year, and for more information see their latest update<http://blogs.biomedcentral.com/gigablog/2014/02/06/rewarding-reproducibil...>.
>
>
> Thanks, and hope to see you in Baltimore!
>
> The GCC2014 Organizing Committee<https://wiki.galaxyproject.org/Events/GCC2014/Organizers>
>
> --
> http://galaxyproject.org/
> http://getgalaxy.org/
> http://usegalaxy.org/
> http://wiki.galaxyproject.org/
>
--
http://galaxyproject.org/GCC2014
http://galaxyproject.org/
http://getgalaxy.org/
http://usegalaxy.org/
https://wiki.galaxyproject.org/
5 years, 10 months
Galaxy Hackathon at GCC2014
by Dannon Baker
Galaxy has a fantastic developer community, from the very active mailing
lists and #galaxyproject IRC channel to individuals who have submitted
literally hundreds of pull requests and patches. We are always looking for
ways to interact with existing community members and get even more people
involved. To that end, we’re thrilled to officially announce the very first
Galaxy Hackathon (http://bit.ly/gcc2014hack). The hackathon will be a
three day event taking place at Johns Hopkins immediately preceding GCC2014
from June 28th-30th.
Do you have a feature you've always wanted to implement? Just want to hack
on Galaxy (or Cloudman!) with other folks? The Galaxy Hackathon will be a
great opportunity to meet and work closely with other community and Galaxy
Team members over the course of three days, culminating in some really
great improvements and new features to show off at the Galaxy Community
Conference afterward.
Participation in the hackathon itself is completely free, but there's
limited space so if you're interested and would like to participate please
go ahead and book both your lodging and hackathon seat at
http://bit.ly/gcc2014hackreg.
To help organize ideas and people into more concrete projects, we've also
set up a hackathon-specific Trello board that we'd love for everyone to go
ahead and start using at https://trello.com/b/3YgU637b/gcc2014-hackathon.
The board is public and open to commentary and voting, but to create new
cards you’ll need to be added as a member so please note the instructions
on the board for that.
Finally, we are very happy to have Curoverse (https://curoverse.com) on
board as the exclusive Peta level sponsor of the hackathon. If you know of
any other group that might be interested in sponsoring at the Giga level
please let us know.
We hope to see you in June, and can't wait to see what we can accomplish!
-Dannon Baker on behalf of the GCC2014 Hackathon Organizing Committee
5 years, 10 months
April 14, 2014 Galaxy Distribution News Brief
by Jennifer Jackson
*April 14, 2013 Galaxy Distribution News Brief*
Distribution Summary 2014_04_14
<https://wiki.galaxyproject.org/News/2014_04_14_Galaxy_Distribution>
*
Highlights:*
* Visualization framework updates and Trackster updates
* Tool Shed updates to repos, test frameworks, and documentation
* Over 100 genomes with updated content on our rsync server
* UI Dataset action controls expanded and overall unification of design
* API functionality additions and new job control/admin abilities
* Administrator, Configuration, Job control, and Egg features and updates
* 18 new community contributions added
Get Galaxy
getgalaxy <http://getgalaxy.org/>
*getgalaxy.org <http://wiki.galaxyproject.org/Admin/Get%20Galaxy>*
*galaxy-dist.readthedocs.org <http://galaxy-dist.readthedocs.org/>*
*bitbucket.org/galaxy/galaxy-dist <http://bitbucket.org/galaxy/galaxy-dist>*
*new*:
$ hg clone https://bitbucket.org/galaxy/galaxy-dist#stable
*upgrade*:
$ hg pull
$ hg update release_2014.04.14
Upgrades
*
*Review instructions for core build:Getting the Stable Distribution
<http://getgalaxy.org/>*
*
*Review reset for Tool Shed repos:Resetting Metadata For Installed
Repositories
<http://wiki.galaxyproject.org/ResettingMetadataForInstalledRepositories>*
Data
1.
New and updated reference genomes added toRsych
<https://wiki.galaxyproject.org/Admin/UseGalaxyRsync>server that
mirrors contents of the public Mainhttp://usegalaxy.org
<http://usegalaxy.org/>instance
* New/updated genomes: 115
o includes hg38
o note: all available in tool "Extract Genomic DNA"
* New bowtie indexes: 60
* New bowtie2 indexes: 115
* New BWA indexes: 54
* New lastz indexes: 54
* New sam indexes: 64
* New picard (srma) indexes: 59
* New liftOver mappings: 163
2.
MAF hg19 100waymultiz conservation alignment sourced fromUCSC
<http://genome.ucsc.edu/>
3.
Replaced: The sam index for hg_g1k_b37 was updated to use "samtools
faidx" with version 0.1.18 (original from GATK 1.4 bundle used
0.1.13). The older index lead to some issues with BAM<->SAM
conversion using the newer SAMTools version.
Visualizations
1.
Framework tuninghttps://trello.com/c/kdhJ1Dit
2.
/Trackster/:
*
Sow complete read/feature across tile boundaries, in all
tileshttps://trello.com/c/Q03dC1QC
*
Better handling of deep coverage regions in read
trackshttps://trello.com/c/TxxzqWNx
Workflows
1.
Prep for dataset collections: Refactor out common logic for running
workflows across controllershttps://trello.com/c/pdGNjllH
UI
1. New/Updated Dataset Action Controls:
* Located at the top of the history pane
* Ability to select: all, none, or check individual datasets
* Actions: Hide, Unhide, Delete, Undelete, Permanently delete (Purge)
*
https://wiki.galaxyproject.org/Learn/Managing%20Datasets#Searching_Datasets
* Additional actions pending review/implementation
*
https://trello.com/c/8gLGPzxV,https://trello.com/c/mq1m6X5M,
2.
When multiple tool versions installed, default to the latest
versionhttps://trello.com/c/zRBZ9nvD
3.
Better handling when one of many versions of a tool repo is
uninstalledhttps://trello.com/c/BmdG2201
4.
Unify the places where histories are shown and used: UI view and in
core codehttps://trello.com/c/7cN0nmKH
5.
Configure workflow menu, improve buttons and
stylinghttps://trello.com/c/xFzp3lt6
6.
Handle disabled sessionStorage/localStorage more gracefully in the
history panehttps://trello.com/c/V2VCxzmx
7.
RemoveBaseViewfrom base-mvchttps://trello.com/c/xUV4qvIc
8.
Do not serve non-HTML content that may containJavaScriptin such a
way that web browsers execute ithttps://trello.com/c/G67ELiMI
9.
There are now 2 interfaces to data libraries (the original and new
Beta) and feedback is welcomedhttps://trello.com/c/d3muKvqr
10.
Wiki page on how to compile the
css.https://wiki.galaxyproject.org/Develop/CSShttps://trello.com/c/gLI6hUjN
API
1. New functions:
*
Make histories importable and/or published via the API is now
implimented (sharing with individual users a pending feature
update)https://trello.com/c/Bcsadi1q
*
History export/importhttps://trello.com/c/qhu1KdWU
*
Ability to extract workflow from a history to
workflowshttps://trello.com/c/ZTehdMZH
2.
Improved history payload and returned error
consistencyhttps://trello.com/c/fWC7WgQf
3.
Checkftypeattribute (if defined) on test output
datasetshttps://trello.com/c/hFFlM4gY
4.
Published histories contents now fully accessible (no permissions
issue)https://trello.com/c/KME3ZRRY
5.
Correct exception formats used in history &
HDAhttps://trello.com/c/bS9wY4Ri
Core
1.
Admin: History view, allow importing purged
datasetshttps://trello.com/c/tbhpQdMF
2.
Admin: User list, show 'activated' and 'create_time'
columnshttps://trello.com/c/C6MhEHWo
3.
Admin: Setting user quota at zero is now permitted
(noZeroDivisionError
<http://moinmo.in/ZeroDivisionError>)https://trello.com/c/38NoBtlL
4.
Admin: Admin user now has permissions to copy datasets from any
history to a libraryhttps://trello.com/c/Ed91qIUC
5.
Admin: Improvements to 'Impersonate User'
implementationhttps://trello.com/c/lny2me4u
6.
Config:
Renametool-data/shared/ucsc/ucsc_build_sites.txttoucsc_build_sites.txt.sample
7.
Jobs: Prevent 'unicode' strings being sent to pbs library as
hostnamehttps://trello.com/c/NlFXYDta
8.
Jobs: Fix Torque CLI runner to recognize complete ('C') state as
'ok'https://trello.com/c/vSO52k17
9.
Jobs: Are now cancelled if a running history item is deleted (via
API).https://trello.com/c/PDmUdtbw
10.
LWR: Several updates including communication via message queue, more
plannedhttps://trello.com/c/6DcXqXNt
11.
LWR: Introduce and extend along withComputeEnvironment, to eliminate
string based path rewritinghttps://trello.com/c/dL0poowc
12.
Egg Update: Guppy 0.1.9+https://trello.com/c/zeSnHEav
13.
Egg Update: Boto 2.25 to facilitate launching into
VPChttps://trello.com/c/QXfJQhlS
14.
Egg Addition: PyYAML 3.10 to be used initially withCloudlaunchfor
parsingpersistent_data yamlhttps://trello.com/c/JMZkqBtH
15.
Lib: package_libpng_1_6_7 deprecated, replaced with
package_libpng_1_6_8https://trello.com/c/Wr5U8laVhttps://trello.com/c/65D...
Pull Requests Merged
Thanks to our Galaxy community contributors!
1.
309 - Job module for API (list and inspect jobs). Kyle
Ellrott.https://trello.com/c/s2Gk6QlH
2.
312 - Remove unused imports and unused variables. Fix spacing.
Nicola Soranzo.https://trello.com/c/iWaf1ak4
3.
316 - Fixing non-string parameter selection for job searches. Kyle
Ellrott.https://trello.com/c/ZXZ9lEkN
4.
317 - Web API: safer and cleaner workflow parameter passing. Simone
Leo.https://trello.com/c/JaC2EBM8
5.
318 - Adding deleted field to 'to_dict' and search selection of
Workflows. Kyle Ellrott.https://trello.com/c/lv9q67nF
6.
315 - Allow jobs to be filtered by tool_id and history_id as well as
by state. The tool_id is compared with the like operator. James
Johnsonhttps://trello.com/c/dvLvPUmK
7.
322 - Added "ignore lines starting with specific characters" to
group tool. Clayton Turner.https://trello.com/c/j6TP6M7m
8.
323 - API methods to access Workflow Usage. Kyle
Ellrott.https://trello.com/c/UetzHj64
9.
325 - Useplaceholderinstead ofvaluein html5 - editor.mako. Trevor
Wennblom.https://trello.com/c/PIZAXsOS
10.
326 - Specify third-party cookies must not be blocked -
repository.py. Trevor Wennblom.https://trello.com/c/XsAUr6wl
11.
331 - Code housekeeping: standardize whitespace in various
locations. Trevor Wennblom.https://trello.com/c/WtWdxP2n
12.
341 - Workflows API enhancements (pull request #337 corrected).
Nicola Soranzo and Simone Leo.https://trello.com/c/zizGdqy1
13.
338 - Patch to expose the actual dataset id in the LDDA and HDA
to_dict calls (in addition to the instance id). Kyle
Ellrotthttps://trello.com/c/BrOscqTJ
14.
339 - Strip trailing slashes in tool IDs. Björn
Grüning.https://trello.com/c/bpKNn66u
15.
334 - Optional Input Datasets Not Compatible with Parallelism Tag.
Michael Lihttps://trello.com/c/WMgr8Xx0https://trello.com/c/Muw6fd8h
16.
346 - Tool panel label bug correction. Nicola
Soranzo.https://trello.com/c/8NpgYM3U
17.
353 - Add BCF datatype sniffing, so BCF files are not uncompressed
during upload. Nicola Soranzo.https://trello.com/c/FVKZhlsU
18.
355 - Workflow API: show also workflow owner, so a user can check it
before importing. Nicola Soranzo.https://trello.com/c/cMiaYcCI
Fixes
1.
Fix issue with tool panel display when the tool_conf.xml has only a
single entryhttps://trello.com/c/6nJIhOdJ
2.
Fix issue when multiple versions of the same tool installed results
in separate entries in the tool panelhttps://trello.com/c/SlNI79mR
3.
Fix Published Page's JS errorhttps://trello.com/c/yGw1DwwM
4.
Fix error in Babel egg utf-8, OSX 10.7https://trello.com/c/PUdh6SWw
5.
Fix failures when using unicode in History name editable_text
fieldshttps://trello.com/c/MTdotrHR
6.
Fix tool form image display for toolshed installed
toolshttps://trello.com/c/5G6jlB4B
7.
Fix to improve link format in user activation
emailshttps://trello.com/c/JALX9DL3
8.
Fix problem with rerun of tools havingDataToolParameter
<http://moinmo.in/DataToolParameter>set as
optionalhttps://trello.com/c/pzHcSGzK
9.
Fix bug in Tool Panel when installing
repositorieshttps://trello.com/c/AiUefffC
Tool Shed
Documentation
1.
Reorganization of the Tool Shed wiki is underway! See current
changeshttps://wiki.galaxyproject.org/ToolShedand what is next
uphttps://trello.com/c/Gg0jnll7
2.
Data Manager documentation specific to
toolshedhttp://wiki.galaxyproject.org/Tool%20Shed#The_contents_of_your_to...
Repositories
1.
New Tool Shed categorieshttps://trello.com/c/niCdaARH
* Genome-Wide Association Study
* Imaging
* RNA
2.
Eliminate the use of fabric as the installation process for
repositorieshttps://trello.com/c/zJoRROvv
3.
Enhancements for updating a repositoryhttps://trello.com/c/c4Y9t7db
* Will now trigger the install of new dependencies
* Handles newly defined repository dependencies included in
updates to installed repositories
4.
Add support for the new repository type: Repository suite
definitionhttps://trello.com/c/sxXMmfLs
5.
Defined a base set of utilities that can be expected to be on
systems into which tool dependencies are being
installedhttps://trello.com/c/gYlRdqwr, related to
project-in-planninghttps://trello.com/c/7VTlX9rD
6.
Dependency ez_setup.py added to keep package_pysam_0_7_7 from
failing on tool shedhttps://trello.com/c/AkACDWix
7.
Update Main Tool Shed Picard repo that contained invalid
toolshttps://trello.com/c/mxxHWxLY
8.
UpdateFreeBayesrepo so that it specifies precompiled binaries in
dependency definitionhttps://trello.com/c/zYoVHKoV
9.
Update EMBOSS repo so that it downloads a precompiled
platform-specific binaryhttps://trello.com/c/iW3Amhl5
Install and Test Framework
1.
Tool shed install and test framework now works with API driven tool
testshttps://trello.com/c/vfr7b0VK
2.
Test script to provide coverage for recently discovered scenario
that produced a white ghost upon Galaxy
installhttps://trello.com/c/JICmJueB
3.
Test script to provide coverage for recently introduced repository
administration featurehttps://trello.com/c/vjTrhIST
4.
Test script to check toolshed dependency files for broken/invalid
download URLshttps://trello.com/c/i4GVgZwS
Tool Shed Fixes
1.
Fix setup_r_environment broken in central
repohttps://trello.com/c/zyCzlgzo
2.
Fix scenario where by uninstalling and reinstalling a repository
that has been updated creates database entries for repositories that
are persistently in the New statehttps://trello.com/c/iUDUM4Ut
3.
Fixes in automated test frameworkhttps://trello.com/c/QWgsgll8
4.
Fix bug in install and test framework related to samtools
migrationhttps://trello.com/c/sN2iLCCn
Project Updates
1.
News <http://wiki.galaxyproject.org/News>
2.
Events <http://wiki.galaxyproject.org/Events>
3.
Videos on Vimeo <https://vimeo.com/galaxyproject>
4.
/April 2014 Galaxy Update
<http://wiki.galaxyproject.org/GalaxyUpdates/2014_04>/
5.
/March 2014 Galaxy Update
<http://wiki.galaxyproject.org/GalaxyUpdates/2014_03>/
------------------------------------------------------------------------
About
*GalaxyProject.org <http://galaxyproject.org/>*
The*Galaxy Team <http://wiki.galaxyproject.org/GalaxyTeam>*is a part of
the*Center for Comparative Genomics and Bioinformatics
<http://www.bx.psu.edu/>*at*Penn State <http://www.psu.edu/>*, and
the*Department of Biology <http://www.bio.jhu.edu/>*at*Johns Hopkinis
University <http://www.jhu.edu/>*.
*Galaxy <http://usegalaxy.org/>*is supported in part by*NSF
<http://www.nsf.gov/>*,*NHGRI <http://www.genome.gov/>*, the*Huck
Institutes of the Life Sciences <http://www.huck.psu.edu/>*, and*The
Institute for CyberScience at Penn State <http://www.ics.psu.edu/>*,
and*Johns Hopkins University <http://www.jhu.edu/>*.
The/public Main instance
<https://wiki.galaxyproject.org/Main>/of*Galaxy*at*http://usegalaxy.org
<http://usegalaxy.org/>*utilizes infrastructure generously provided by
the*iPlant Collaborative <http://www.iplantcollaborative.org/>*at
the*Texas Advanced Computing Center <https://www.tacc.utexas.edu/>*,
with support from the*National Science Foundation <http://www.nsf.gov/>*.
Follow us on*Twitter@galaxyproject <http://twitter.com/galaxyproject>*or
read our tweets at*Galaxy on Twitter
<https://wiki.galaxyproject.org/GalaxyOnTwitter>*
Have a suggestion? Please see*Using the Galaxy Issue Board
<http://wiki.galaxyproject.org/Issues>*, and be sure to up vote the
issues important to YOU.
--
Jennifer Hillman-Jackson
http://galaxyproject.org
5 years, 10 months