1 new changeset in galaxy-central:
http://bitbucket.org/galaxy/galaxy-central/changeset/4aa68bbab83f/
changeset: r4996:4aa68bbab83f
user: james_taylor
date: 2011-02-04 20:29:23
summary: Disable overview canvas saving for now, need to do this right
affected #: 1 file (173 bytes)
--- a/static/scripts/trackster.js Fri Feb 04 14:17:07 2011 -0500
+++ b/static/scripts/trackster.js Fri Feb 04 14:29:23 2011 -0500
@@ -1374,6 +1374,8 @@
}
if (tile_element) {
// Store initial canvas in case we need to use it for overview
+ /* This is completely broken, just saves the first tile it sees
+ regardless of if it should be the overview
if (!track.initial_canvas && !window.G_vmlCanvasManager) {
track.initial_canvas = $(tile_element).clone();
var src_ctx = tile_element.get(0).getContext("2d");
@@ -1382,6 +1384,7 @@
tgt_ctx.putImageData(data, 0, 0);
track.set_overview();
}
+ */
// Add tile to cache and show tile.
track.tile_cache.set(key, tile_element);
track.show_tile(tile_element, parent_element, tile_low);
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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1 new changeset in galaxy-central:
http://bitbucket.org/galaxy/galaxy-central/changeset/8d388719e25c/
changeset: r4991:8d388719e25c
user: natefoo
date: 2011-02-03 22:06:20
summary: Uncomment BLAST+ tools in the sample config.
affected #: 1 file (108 bytes)
--- a/tool_conf.xml.sample Thu Feb 03 15:52:44 2011 -0500
+++ b/tool_conf.xml.sample Thu Feb 03 16:06:20 2011 -0500
@@ -219,8 +219,6 @@
<tool file="fastx_toolkit/fasta_nucleotide_changer.xml" /><tool file="fastx_toolkit/fastx_collapser.xml" /></section>
- <!-- The BLAST+ tools are not hosted on Galaxy Test but are provided for
- local installations
<section name="NCBI BLAST+" id="ncbi_blast_plus_tools"><tool file="ncbi_blast_plus/ncbi_blastn_wrapper.xml" /><tool file="ncbi_blast_plus/ncbi_blastp_wrapper.xml" />
@@ -229,7 +227,6 @@
<tool file="ncbi_blast_plus/ncbi_tblastx_wrapper.xml" /><tool file="ncbi_blast_plus/blastxml_to_tabular.xml" /></section>
- --><section name="NGS: QC and manipulation" id="cshl_library_information"><label text="Illumina data" id="illumina" /><tool file="fastq/fastq_groomer.xml" />
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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1 new changeset in galaxy-central:
http://bitbucket.org/galaxy/galaxy-central/changeset/1c997fdae745/
changeset: r4990:1c997fdae745
user: natefoo
date: 2011-02-03 21:52:44
summary: Fix for the histogram tool for the "'x' must be numeric" error experienced by some local installations. Thanks, Jim Johnson.
affected #: 1 file (7 bytes)
--- a/tools/plotting/histogram.py Thu Feb 03 15:33:45 2011 -0500
+++ b/tools/plotting/histogram.py Thu Feb 03 15:52:44 2011 -0500
@@ -69,7 +69,7 @@
first_invalid_line = i+1
if valid:
- matrix.append( row )
+ matrix += row
if skipped_lines < i:
try:
Repository URL: https://bitbucket.org/galaxy/galaxy-central/
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